Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3450 ATGGTGAATTTAGTGGCAGCACAAAAACCATTGATGCATGGTCTAATGAAAATGGCAGGGATAAGTCCCTACACAGTAGAGATAGAATCAGGTACTATAATGAGTTTTTGGGTACCTTCAGAAACCATAACAAAACCTAAGAAAAAAGAAGAAAAGCCCAAAATTATTACCAAGCCCAATAAGCCCGTAGTTGTTTTAGTCCACGGTTTTGCCGCGGAAGGAATAGTAACATGGCAATTTCAAGTTGGTGCATTAACTAAAAAATACTCCGTTTATATTCCGGATCTTCTGTTCTTCGGAGGATCCGGAACAGATAAAACGGAGAGAACACCGAGGTTGCAAGCGGAGTGTTTGGCAATAGCTTTAAGGAAACTCGGTGTTGAGAAGTGTATTGTTGTTGGTTTTAGCTACGGTGGAATGGTTGCGTTTAAGATGGCTGAAATGTATCCTGAATTGGTTCAAGCTATAGTTATATCTGGATCCATTTTGGCTATGACTGATTCTATTAGTGAAAGTTCATTACAAGAACTTGGATTTTCTTCTTCTTCTGAGCTTTTGTTGCCTAATTCTGTTAAAGGTCTTAAAGCACTTTTGTCAGTTGCTGCTTATAAAAAGCTTTGGTTCCCAAATCGGTTACACAAAGATTTTCTTGAGGTGATGTTCGAGAATAGGAAGGAACGAGGTGAGCTATTAGAGGGCTTAGTAATTAGCAATAAAGACATCGAAATTCCATCTTTTCCACAGAGGATACATCTTCTATGGGGAGAAAATGATCAAATTTTCAAATTGGAACTTGCTCAAAATATGAAAGAGCAACTTGGAGATGGCACAACGTTTGAAGGCATAAAGAAAGCTGGCCACCTTGTTCACTTGGAAAGACCATGTGTCTACAATAGATGCCTCAAGAAGTTTATTGCTTCCTTCTTGGCATCAAATGAAGCCAAATAA 948 0.3861 MVNLVAAQKPLMHGLMKMAGISPYTVEIESGTIMSFWVPSETITKPKKKEEKPKIITKPNKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSGTDKTERTPRLQAECLAIALRKLGVEKCIVVGFSYGGMVAFKMAEMYPELVQAIVISGSILAMTDSISESSLQELGFSSSSELLLPNSVKGLKALLSVAAYKKLWFPNRLHKDFLEVMFENRKERGELLEGLVISNKDIEIPSFPQRIHLLWGENDQIFKLELAQNMKEQLGDGTTFEGIKKAGHLVHLERPCVYNRCLKKFIASFLASNEAK* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3450 315 PANTHER SI:DKEY-122A22.2 2 308 - -
Mal5g3450 315 Gene3D alpha/beta hydrolase 17 308 IPR029058 -
Mal5g3450 315 Pfam alpha/beta hydrolase fold 62 174 IPR000073 -
Mal5g3450 315 PRINTS Epoxide hydrolase signature 146 159 IPR000639 GO:0003824
Mal5g3450 315 PRINTS Epoxide hydrolase signature 132 145 IPR000639 GO:0003824
Mal5g3450 315 PRINTS Epoxide hydrolase signature 282 304 IPR000639 GO:0003824
Mal5g3450 315 PRINTS Epoxide hydrolase signature 88 103 IPR000639 GO:0003824
Mal5g3450 315 SUPERFAMILY alpha/beta-Hydrolases 59 306 IPR029058 -
Mal5g3450 315 PRINTS Alpha/beta hydrolase fold signature 250 264 IPR000073 -
Mal5g3450 315 PRINTS Alpha/beta hydrolase fold signature 132 145 IPR000073 -
Mal5g3450 315 PRINTS Alpha/beta hydrolase fold signature 146 159 IPR000073 -
Mal5g3450 315 PRINTS Alpha/beta hydrolase fold signature 88 103 IPR000073 -
Mal5g3450 315 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 2 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3450 Mal-Chr5 99486310 99491691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3450 62 309 Acyl Lipid Metabolism Gene Families AT4G15960 23.179 4.39e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3450 - - gmx:100816070 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1134 6 17330577 17336908 Mal5g3450 5 99486310 99491691 ECH
Mal5g3450 5 99486310 99491691 Mal5g3450 5 99486310 99491691 ECH
Mal6g1135 6 17340407 17342588 Mal5g3450 5 99486310 99491691 PCT