Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3425 ATGGAGAACCTGGCTCTCCGTGCACCTTCAACCTCCTCAACTGTTCCTCCCCCATTTCAAATTCAACACTCTTTCTTTGCCGTTGGATTCACCACCCGAACCACCTTCCTTCGTAACCAAACCGAATTTACACCACACCTCTGTTGCCGAACCAGACACTATCGCTCCAAACCATTTTCAACCAAACAAGAACTTTTTCTTCTTCAACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGTGCTTCGTATTCCGACGATGACACTTCCTTCTTATCCCTCAGTGAAAAGCCTGACCGGAATTTGGGCTTGCTTGATGATTATGAGACTGAGGAACTTGGTTATGACCGTGGTCCTAACCACCGAAGCGGATATGTGGCTTTACTTGGTAAACCAAATGTTGGGAAGAGTACACTGGCAAACCAAATGGTTGGCCAAAAGTTGTCGATAGTTACAGATAAACCTCAAACAACAAGGCATCGAATTCTCTGTATATGTTCTACCTCGGATTATCAGATGGTACTTTATGATACTCCCGGTGTTCTACAAGAGCAAAGGCACAAGTTAGACTCCATGATGATGCAAAATGTTCGCAGTGCTGCAGTTAATGCTAACTGTGTGTTGATTCTTGTAGATGCATGTAAAGCGCCTGAAAAAATTGATGAAGTGTTGGCAGAAGGCATAGGAGACCAGAAAGATAAACCCCCCACTCTATTGATTATGAACAAGAAGGATCTTATCAAGCCTGGTGAAGTTGCAAAGAAACTTGAGTGGTATACAAAATTTACTGATGTTGATGAGGTTATACCAGTTAGTGCCAAGTTTGGTTATGGGGTTGAAGATGTCAAGAACTGGATACTATCAAAGCTTCCTAATGGACCAGTTTATTATCCAAAGGATATTGTGAGTGAGCATCCAGAAAGATTTTTTGTAGCTGAAATTGTTAGAGAAAAGATTTTTTTGCAATATCGAAATGAAATCCCCTATGTGTGTCAGGTGAATGTTGTAAGCTATAAGGCTCGACCAAATGCAAAAGATTTTATCCAGGTGGAGATTTTGGTTGAGAGAAACTCGCAGAAAATGATCATTATTGGAAAAGAAGGAAAAGCTTTAAAACTGCTTGCAACAGCTGCACGTCTTGACGTTGAAGATTTTCTAAAGAAGAAAGTTTATCTAGAGATTCAAGTAAAGATTAAAGAAAATTGGCGACAAGATGAAGGGTTTCTTAAGCACTCTGGTTATGGAGGTCAAATAGGTGTTGTATGA 1266 0.4028 MENLALRAPSTSSTVPPPFQIQHSFFAVGFTTRTTFLRNQTEFTPHLCCRTRHYRSKPFSTKQELFLLQQEEEEEEEEEESASYSDDDTSFLSLSEKPDRNLGLLDDYETEELGYDRGPNHRSGYVALLGKPNVGKSTLANQMVGQKLSIVTDKPQTTRHRILCICSTSDYQMVLYDTPGVLQEQRHKLDSMMMQNVRSAAVNANCVLILVDACKAPEKIDEVLAEGIGDQKDKPPTLLIMNKKDLIKPGEVAKKLEWYTKFTDVDEVIPVSAKFGYGVEDVKNWILSKLPNGPVYYPKDIVSEHPERFFVAEIVREKIFLQYRNEIPYVCQVNVVSYKARPNAKDFIQVEILVERNSQKMIIIGKEGKALKLLATAARLDVEDFLKKKVYLEIQVKIKENWRQDEGFLKHSGYGGQIGVV* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3425 421 ProSiteProfiles Type-2 KH domain profile. 323 400 IPR004044 GO:0003723
Mal5g3425 421 TIGRFAM era: GTP-binding protein Era 124 397 IPR005662 GO:0003723|GO:0005525
Mal5g3425 421 MobiDBLite consensus disorder prediction 70 85 - -
Mal5g3425 421 CDD Era 121 290 IPR030388 GO:0005525
Mal5g3425 421 Gene3D - 303 418 IPR015946 -
Mal5g3425 421 ProSiteProfiles Era-type guanine nucleotide-binding (G) domain profile. 122 292 IPR030388 GO:0005525
Mal5g3425 421 PANTHER GTPASE ERA 77 415 IPR005662 GO:0003723|GO:0005525
Mal5g3425 421 PANTHER GTPASE ERA-LIKE, CHLOROPLASTIC 77 415 - -
Mal5g3425 421 Pfam 50S ribosome-binding GTPase 126 243 IPR006073 GO:0005525
Mal5g3425 421 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 126 324 IPR027417 -
Mal5g3425 421 Coils Coil 67 87 - -
Mal5g3425 421 MobiDBLite consensus disorder prediction 70 96 - -
Mal5g3425 421 Pfam KH domain 326 403 IPR004044 GO:0003723
Mal5g3425 421 Gene3D - 119 301 IPR027417 -
Mal5g3425 421 TIGRFAM small_GTP: small GTP-binding protein domain 126 283 IPR005225 GO:0005525
Mal5g3425 421 SUPERFAMILY Prokaryotic type KH domain (KH-domain type II) 299 414 IPR009019 GO:0003723
Mal5g3425 421 Hamap GTPase Era [era]. 121 414 IPR005662 GO:0003723|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3425 Mal-Chr5 99033511 99038086 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3425 K03595 - gmx:100815820 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3425 5 99033511 99038086 Mal5g3425 5 99033511 99038086 ECH