Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3388 ATGAAGTATTCACGCTTCCTTCAACTTTCACGACTCCACAAAGCCCTAACTCAAAACCCTAATTTCTCTTCTCCCCCAATTCCAAAACCCTACATCATCCCCCCAAATCCAAAATCCCAATACATTTCCACCTCCATCCGCAATTACAGCACCGCTTCACAAGATTCCGAAAAAGTATCTGCAATCGTCGACGAACTCGCGGGATTAACACTATTGGAAGTAATGGATCTCGTTGAAGTGATGAGGGAGAAAAAGGGAATCAACGAGCTTCCGATTATGATGTTGATGGTACCTGGAATGGGAATAAGGGGAATGCCGAGGGGTGTGGGTGGAGGGGGTGGTGGTGGTGGAGAAAAGGGAGGTGAGGAGAAGAAAGTTGAGGAGAAAACGGCGTTTGATGTGAAGCTTGATGGTTTTGATGCCGCGTCGAAGATTAAGGTTATTAAGGAAGTTAGGAGTTTTACTAGTTTGGGTTTGAAGGAAGCTAAGGATTTGGTGGAGAAAGCGCCTACGCTTTTGAAGAAAGGTGTGACGAAGGAAGAGGCCGAGGGGATTATTGCTAAGTTGAAGGAGATTGGAGCAAAAGCTTCTATGGAATGA 600 0.4567 MKYSRFLQLSRLHKALTQNPNFSSPPIPKPYIIPPNPKSQYISTSIRNYSTASQDSEKVSAIVDELAGLTLLEVMDLVEVMREKKGINELPIMMLMVPGMGIRGMPRGVGGGGGGGGEKGGEEKKVEEKTAFDVKLDGFDAASKIKVIKEVRSFTSLGLKEAKDLVEKAPTLLKKGVTKEEAEGIIAKLKEIGAKASME* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3388 199 Pfam Ribosomal protein L7/L12 C-terminal domain 132 198 IPR013823 GO:0003735|GO:0006412
Mal5g3388 199 SUPERFAMILY ClpS-like 127 198 IPR014719 -
Mal5g3388 199 Gene3D Single helix bin 58 128 IPR036235 GO:0003735|GO:0005840|GO:0006412
Mal5g3388 199 Gene3D - 129 198 IPR014719 -
Mal5g3388 199 PANTHER 39S RIBOSOMAL PROTEIN L12 37 199 IPR000206 GO:0003735|GO:0005840|GO:0006412
Mal5g3388 199 SUPERFAMILY Ribosomal protein L7/12, oligomerisation (N-terminal) domain 58 134 IPR036235 GO:0003735|GO:0005840|GO:0006412
Mal5g3388 199 MobiDBLite consensus disorder prediction 106 126 - -
Mal5g3388 199 CDD Ribosomal_L7_L12 57 198 IPR000206 GO:0003735|GO:0005840|GO:0006412
Mal5g3388 199 Hamap 50S ribosomal protein L7/L12 [rplL]. 56 199 IPR000206 GO:0003735|GO:0005840|GO:0006412
Mal5g3388 199 Pfam Ribosomal protein L7/L12 dimerisation domain 58 96 IPR008932 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3388 Mal-Chr5 97874059 97874658 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3388 K02935 - gmx:100775592 197.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3388 5 97874059 97874658 Mal5g3388 5 97874059 97874658 ECH