Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3380 ATGAGTGAAGTAAATCACCAAATAATCAAAACCAACGGAATAAATATACACGTAGCAGAGCAAGGAACAGGACCACTTGTTCTGTTGCTTCATGGTTTCCCAGAAATATGGTATTCTTGGCGACACCAACTCAACTACTTGGGTCAACATGGTTATCATGCTGTTGCACCTGATTTAAGAGGATATGGTGACTCTGATTCTCCTATCAACTCGAATTCCTACACTCTTCACCACATCGTAGGTGACCTTATTGGTCTTCTTGATCATTTTGGTGAACAACAGGCATATGTAGTTGGATCTGATTGGGGAGCAAACATTGGATGGCACCTAAGTCTATTTAGGCCGGATAGAGTGAAGGGATTTGTTGCTCTATGTGTTCCTTACTTTCCAAGATCCCCAACAGATAAGACTGTTGAAACTATAAGAAAAATATATGGAGATGGAGCTCATGTTTGCCAATTCCAGGAACCAGGTCGTGCAGAAAGAGCTTTTGCTAGATATGATTGTTTGACAGTGATGAAGAAGTTTTTGCTGATTACATGGACACAATTTATAACAGCTCCTCCTGGCATGGAGATTGTTGATTTCTTGCCAACTCCTTCGGTTTTGCCGTCGTGGATAACCGAGGAAGAACTCATGGTTTTTGCAGACAAATTCCAAGAGTCTGGTTTCACTGGTGCATTCAATTATTATCGCGCAATGGACCTAAGCTGGGAACTTCTAGCACCATGGCAAGGATCAAAGATAATAGTTCCAACTAAGTTTATTGCTGGAGACAAAGATGTTGGTTTCCAAAATGGGGGTACAAAAGATTTTGTAGAAGGTGATATTTTCAAGACTCTTGTTCCCAACCTTGAAGTGGTTATACTAGATGGTCACCACTATATACATCAAGAGAAAGCTCAACAAGTTTCAGAGGAAATCCTTTCCTTCATCCGTAAATTATCTCTAGAGTAG 957 0.4054 MSEVNHQIIKTNGINIHVAEQGTGPLVLLLHGFPEIWYSWRHQLNYLGQHGYHAVAPDLRGYGDSDSPINSNSYTLHHIVGDLIGLLDHFGEQQAYVVGSDWGANIGWHLSLFRPDRVKGFVALCVPYFPRSPTDKTVETIRKIYGDGAHVCQFQEPGRAERAFARYDCLTVMKKFLLITWTQFITAPPGMEIVDFLPTPSVLPSWITEEELMVFADKFQESGFTGAFNYYRAMDLSWELLAPWQGSKIIVPTKFIAGDKDVGFQNGGTKDFVEGDIFKTLVPNLEVVILDGHHYIHQEKAQQVSEEILSFIRKLSLE* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3380 318 Pfam alpha/beta hydrolase fold 25 299 IPR000073 -
Mal5g3380 318 Gene3D alpha/beta hydrolase 1 316 IPR029058 -
Mal5g3380 318 PANTHER EPOXIDE HYDROLASE 1 316 - -
Mal5g3380 318 PANTHER BIFUNCTIONAL EPOXIDE HYDROLASE 2 1 316 - -
Mal5g3380 318 SUPERFAMILY alpha/beta-Hydrolases 3 314 IPR029058 -
Mal5g3380 318 PRINTS Epoxide hydrolase signature 111 124 IPR000639 GO:0003824
Mal5g3380 318 PRINTS Epoxide hydrolase signature 31 49 IPR000639 GO:0003824
Mal5g3380 318 PRINTS Epoxide hydrolase signature 97 110 IPR000639 GO:0003824
Mal5g3380 318 PRINTS Epoxide hydrolase signature 289 311 IPR000639 GO:0003824
Mal5g3380 318 PRINTS Epoxide hydrolase signature 51 66 IPR000639 GO:0003824
Mal5g3380 318 PRINTS Epoxide hydrolase signature 251 267 IPR000639 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3380 Mal-Chr5 97790770 97792836 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3380 2 316 Acyl Lipid Metabolism Gene Families AT3G51000 64.577 1.65e-155 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3380 - - gmx:100818894 562.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3380 5 97790770 97792836 Mal5g3380 5 97790770 97792836 ECH