Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3347 ATGGCCATTAGAAAATCCAACAAGCTACCACAACCAGATGTTATCATCAAGCAAATTCTTAAAAGATGTTCAAGTTTTGGAAAGAAAAATGGTTACAATGAAGAGAGTCTTCCTGAAGATGTACCAAAAGGTCACTTTGTTGTCTATGTTGGAGAAAATAGAACAAGATATATTGTTCCAATTTCTTGGTTGCCTCATCCACAATTTCAAAGATTGCTTCAAAGAGCTGAGGAAGAATTTGGATTCAATCATGACATGGGCCTTACCATCCCTTGTGATGAAGTTGTTTTCGAGTTTCTTACTTCGTTGATCAGATAA 318 0.3585 MAIRKSNKLPQPDVIIKQILKRCSSFGKKNGYNEESLPEDVPKGHFVVYVGENRTRYIVPISWLPHPQFQRLLQRAEEEFGFNHDMGLTIPCDEVVFEFLTSLIR* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3347 105 Pfam Auxin responsive protein 28 103 IPR003676 GO:0009733
Mal5g3347 105 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 6 105 - -
Mal5g3347 105 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 105 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3347 Mal-Chr5 97198952 97199269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3347 5 104 Calmodulin-binding Proteins AT4G34750 44.000 2.77e-20 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3347 K14488 - gmx:100500218 186.422
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1041 6 15633334 15633648 Mal5g3347 5 97198952 97199269 ECH
Mal2g0495 2 5779816 5780136 Mal5g3347 5 97198952 97199269 ECH
Mal5g3347 5 97198952 97199269 Mal5g3347 5 97198952 97199269 ECH
Mal7g2642 7 88533291 88533608 Mal5g3347 5 97198952 97199269 ECH