Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3344 ATGGGGGAAGGAAGAGAAGGGGATTGGGAGTGCAGTAGTTGCAACAACAGAAACTACGCATTCAGATCATTCTGCAATCGATGCAAACAACCACGTCTTCTCGTTGATACCAAAACCCCTGCTGATTCCAAATGGCTCCCTCGTATCGGTGATTGGATCTGCACCGGTTGCACTAACAACAATTATGCATCAAGAGAGAAGTGCAAGAAGTGCGGACAACCAAAGGAGGTAGCAGCCATGCCAGCAATTGCAATGACGGGACCATCTTTCCCTGCTTATCCACATTATTTTTCCAGGGTTCCGGGAGGACCAGAACAAAGGATGAATATTGGATTGATTGGAAACGGTGTGCCACCGCAGCCGCTGAATTTGAATTATAATTGGCCTGTTACTGGAGCTGAAAAGTTTGGTGTCCAGCCAGTTTCCCTATGGCCACCAGGTGTAAATTATAGTTCTGGATATCCCACTAGTCAGAACCCATCTACTCCAAATGGGTGGCGCAATGGAGACTGGGTCTGTAACTGCGGCTTCCATAATTACTCCTCACGCTCACAATGTAAAAAATGCAATGCTTCTCCACCAGCACTTGGCACAAAACGGTTAGCTTCTGAAGAATTGGTTTATGACTGGGATAACAAGAGATTGAACGTAGGACCTACGAATGATCAGCAGCAAGCAGTAGGGACCAGTTCAGAACCAAGACCTGCACTCCCCCCTGCTTATGCCAGCATTAACTCTAGTTCGGCACCAAGCTTGCCAATGCCCCCACTCTTTCCAATTCCACCTCAAGTTTCTTCTGCAGCACTCCTTGGAAAAGGAGCAAAGCAATGGCGAAGTGGTGATTGGATGTGCACAAATTGCAACAATCATAATTATGCGTCCAGACTAGAGTGTAACAGGTGTAAAACAGTCAGAGTGGCACCCATGCAACCCGTCAATGTTGTGTAA 948 0.4705 MGEGREGDWECSSCNNRNYAFRSFCNRCKQPRLLVDTKTPADSKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPAIAMTGPSFPAYPHYFSRVPGGPEQRMNIGLIGNGVPPQPLNLNYNWPVTGAEKFGVQPVSLWPPGVNYSSGYPTSQNPSTPNGWRNGDWVCNCGFHNYSSRSQCKKCNASPPALGTKRLASEELVYDWDNKRLNVGPTNDQQQAVGTSSEPRPALPPAYASINSSSAPSLPMPPLFPIPPQVSSAALLGKGAKQWRSGDWMCTNCNNHNYASRLECNRCKTVRVAPMQPVNVV* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3344 315 SUPERFAMILY Ran binding protein zinc finger-like 5 33 IPR036443 -
Mal5g3344 315 PANTHER ZINC FINGER PROTEIN 165 249 - -
Mal5g3344 315 PANTHER OS04G0110600 PROTEIN 270 314 - -
Mal5g3344 315 PANTHER OS04G0110600 PROTEIN 165 249 - -
Mal5g3344 315 PANTHER OS04G0110600 PROTEIN 3 136 - -
Mal5g3344 315 ProSitePatterns Zinc finger RanBP2-type signature. 9 28 IPR001876 -
Mal5g3344 315 ProSiteProfiles Zinc finger RanBP2 type profile. 167 195 IPR001876 -
Mal5g3344 315 MobiDBLite consensus disorder prediction 216 231 - -
Mal5g3344 315 ProSitePatterns Zinc finger RanBP2-type signature. 52 71 IPR001876 -
Mal5g3344 315 SUPERFAMILY Ran binding protein zinc finger-like 272 307 IPR036443 -
Mal5g3344 315 SUPERFAMILY Ran binding protein zinc finger-like 162 192 IPR036443 -
Mal5g3344 315 SMART zf_4 7 31 IPR001876 -
Mal5g3344 315 SMART zf_4 169 192 IPR001876 -
Mal5g3344 315 SMART zf_4 280 304 IPR001876 -
Mal5g3344 315 SMART zf_4 50 74 IPR001876 -
Mal5g3344 315 MobiDBLite consensus disorder prediction 215 248 - -
Mal5g3344 315 ProSiteProfiles Zinc finger RanBP2 type profile. 48 77 IPR001876 -
Mal5g3344 315 ProSiteProfiles Zinc finger RanBP2 type profile. 278 307 IPR001876 -
Mal5g3344 315 Gene3D - 42 77 - -
Mal5g3344 315 Gene3D - 273 307 - -
Mal5g3344 315 Gene3D - 3 33 - -
Mal5g3344 315 Gene3D - 161 195 - -
Mal5g3344 315 ProSitePatterns Zinc finger RanBP2-type signature. 282 301 IPR001876 -
Mal5g3344 315 Pfam Zn-finger in Ran binding protein and others 278 305 IPR001876 -
Mal5g3344 315 Pfam Zn-finger in Ran binding protein and others 48 76 IPR001876 -
Mal5g3344 315 Pfam Zn-finger in Ran binding protein and others 5 32 IPR001876 -
Mal5g3344 315 PANTHER ZINC FINGER PROTEIN 270 314 - -
Mal5g3344 315 PANTHER ZINC FINGER PROTEIN 3 136 - -
Mal5g3344 315 ProSiteProfiles Zinc finger RanBP2 type profile. 5 34 IPR001876 -
Mal5g3344 315 SUPERFAMILY Ran binding protein zinc finger-like 42 76 IPR036443 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3344 - - lja:Lj4g3v1037490.1 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3344 5 97128707 97131518 Mal5g3344 5 97128707 97131518 ECH