Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3340 ATGGCACCAGCCAAAACTCTCAAATATCTTGCTCAAGAAAAGACCCTTGAGTCAAGTTTCGTTCGTGAAGAAGATGAGCGTCCAAAAGTTGCATACAATAACTTCAGCAACGAAATTCCAATCATTTCTCTTGATGGAATTGACGATGTCGGTGGCCGGAGAACAGAGATATGCAACAAGATAGTAGAAGCTTGTGAGAATTGGGGTATCTTCCAAGTTGTTGATCATGGTGTTGATTCAAATCTTATTTCTGAGATGACTCGTTTTGCTAAAGGGTTCTTTGATTTGCCACCAGAAGAAAAGCTTCGTTTTGACATGTCTGGTGGTAAAAAGGGTGGCTTCATTGTCTCTAGTCATCTCCAAGGAGAAGCTGTGAAGGATTGGAGAGAATTAGTGACATATTTTTCATACCCAATTAGACAAAGAGACTATTCAAGGTGGCCAGACAAGCCAGAAGGATGGAAAGAAGTAACAGAAGAATACAGTGAGAAGCTAATGAATTTAGCTTGCAAGCTATTGGAAGTGTTATCAGAAGCTATGGGTTTAGAAAAAGAAGCTCTAACAAAAGCATGTGTTGATATGGATCAAAAGGTAGTGATCAATTACTACCCAAAATGCCCTGAACCAGACCTAACTCTTGGGCTAAAAAGACACACTGACCCTGGCACTATCACTCTATTGCTTCAAGACCAAGTGGGTGGTCTTCAAGCTACCAAAGATAATGGTAAGACGTGGATCACTGTTCAACCAGTTGAAGGTGCTTTTGTTGTTAATCTTGGAGACCATGGTCACTTTCTAAGTAATGGACGGTTCAAAAATGCTGATCACCAAGCAGTGGTGAATTCCAATTACAGTCGTTTATCCATAGCAACATTCCAAAACCCAGCACCAGATGCAACTGTGTACCCTTTGAAGATTAGAGAAGGAGAGAAATCTGTGATGGAGGAACCAATTACTTTTGCTGAAATGTATAGGAGGAAGATGAGCAAGGACCTTGAGATTGCTAGGATGAAGAAGTTGGCTAAGGAACAAGAACTTCGGGACTTAGAGAAGGCAAAACTTGAAGCCAAGCCTTTGAATGAGATCCTTGCTTAG 1095 0.41 MAPAKTLKYLAQEKTLESSFVREEDERPKVAYNNFSNEIPIISLDGIDDVGGRRTEICNKIVEACENWGIFQVVDHGVDSNLISEMTRFAKGFFDLPPEEKLRFDMSGGKKGGFIVSSHLQGEAVKDWRELVTYFSYPIRQRDYSRWPDKPEGWKEVTEEYSEKLMNLACKLLEVLSEAMGLEKEALTKACVDMDQKVVINYYPKCPEPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNYSRLSIATFQNPAPDATVYPLKIREGEKSVMEEPITFAEMYRRKMSKDLEIARMKKLAKEQELRDLEKAKLEAKPLNEILA* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3340 364 PANTHER NARINGENIN,2-OXOGLUTARATE 3-DIOXYGENASE 9 345 - -
Mal5g3340 364 Pfam non-haem dioxygenase in morphine synthesis N-terminal 39 149 IPR026992 -
Mal5g3340 364 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 9 345 - -
Mal5g3340 364 Gene3D - 5 334 IPR027443 -
Mal5g3340 364 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 191 295 IPR005123 -
Mal5g3340 364 Pfam 2OG-Fe(II) oxygenase superfamily 196 294 IPR044861 -
Mal5g3340 364 Coils Coil 332 352 - -
Mal5g3340 364 SUPERFAMILY Clavaminate synthase-like 11 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3340 Mal-Chr5 97093087 97095534 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3340 38 305 Glycosyltransferase AT5G59530 33.818 1.40e-45 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3340 K00475 - vvi:100233079 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3340 5 97093087 97095534 Mal5g3340 5 97093087 97095534 ECH