Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3307 ATGTTGCAAGAGATGTGGAATGCACCCCCAGGTTTCAGACCCTCCAAATCAGCACCTTCTTCACCTGCAAAACCTCTTGCTGTTTCCAGAACTCGTTCTGAATCTTTTCACATCACTCATAAGGTTCCTGTTGGTGATACTCCTTATGTCAGAGCCAAAAATGTTCAGTTGGTGGATAAGGATCCGGAGAGGGCAATTCCGTTGTTTTGGGCGGCGATAAATGCGGGAGATAGAGTGGACAGTGCTTTGAAAGATATGGCTATTGTTATGAAGCAACAGAATAGGGCTGAAGAAGCTATTGAAGCTATTAAGTCACTTAGAAGTAGATGCTCAGATCAAGCACAAGAATCCCTTGATAATATCCTATTGGATCTCTACAAGAGATGTGGTAGGCTTGATGACCAAATTGCTCTATTGAGGCATAAGCTGTATTTAATCCAACAAGGGTTGGCTTTCAATGGCAAGCGCACAAAGACTGCTAGATCTCAAGGGAAGAAGTTTCAAGTCTCAGTTGAACAAGAAGCCACTAGATTATTGGGAAACTTAGGATGGGCACTGATGCAACAAAACAACTACATAGAAGCAGAAGAAGCCTATCGCCGCGCGCTTTGTCTAGCTCCAGACAACAACAAGATGTGCAATTTAGGCATTTGTTTGATGAAACAAGGAAGAATAGCTGAAGCAAAAGAAACACTCCATAGGGTCAAGCCTGCAGTTACAGATGGACCAAGAGGCTCAGATTCTCATCTGAAAGCCTATGAAAGAGCACAGCAAATGCTCAAAGACCTCGAATCCGAAATGATGAACAGAATAGGAGTGGATAGACTTGAACAAAGTAGACTCTTTGAAGCTTTTCTTGGTTCTTCATCAATTTGGCAACCTCAGCCTTGTAAGGATCAAATTCACACAAGCTTGCCACCAATCAGAACAACATCAGCAACAATTCAAGATGAATTTGGTGATGAGAATATCAATTCTAATCCCAACATAGTGAAAAATCACACAGCTCAACCACAAAACAAGTTTACTCCTTTGGTGAACAACTCACTTAATGTTGCTGCTCCACCATTCTATGCAGCAAAATCATCTTTCAATGAAACAAATGAGAATTTGAGTTTCTCTGAGACACTTAAGAGAACAAGGTCAGGAAATGCTGCTGGATTAATGAGAGTGGAGGATGTGAACAGCAACAAGGTGGTGAATGTGGAATTAGGTGTGCCTGTGCCTGGGAACAAAGCTAGAAGGCTTTCTTTTGAGAAGAATAAGTTGTGTGATTTGTTACCTGATACTAAGGATTTTGAAGATGCTATTCTTGCTGCTTGTTTGGGGACTTCAAATGAGCTGGAGAATGAAAATGCTACCACTACTTCTGGGATTTTTCCTAAGAAAATTGATAAGAGGAGGCTTAAAGTTTTTCAGGATATTACATTATCTTTGAGTCCAAAGGCTTAA 1452 0.4098 MLQEMWNAPPGFRPSKSAPSSPAKPLAVSRTRSESFHITHKVPVGDTPYVRAKNVQLVDKDPERAIPLFWAAINAGDRVDSALKDMAIVMKQQNRAEEAIEAIKSLRSRCSDQAQESLDNILLDLYKRCGRLDDQIALLRHKLYLIQQGLAFNGKRTKTARSQGKKFQVSVEQEATRLLGNLGWALMQQNNYIEAEEAYRRALCLAPDNNKMCNLGICLMKQGRIAEAKETLHRVKPAVTDGPRGSDSHLKAYERAQQMLKDLESEMMNRIGVDRLEQSRLFEAFLGSSSIWQPQPCKDQIHTSLPPIRTTSATIQDEFGDENINSNPNIVKNHTAQPQNKFTPLVNNSLNVAAPPFYAAKSSFNETNENLSFSETLKRTRSGNAAGLMRVEDVNSNKVVNVELGVPVPGNKARRLSFEKNKLCDLLPDTKDFEDAILAACLGTSNELENENATTTSGIFPKKIDKRRLKVFQDITLSLSPKA* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3307 483 Coils Coil 246 266 - -
Mal5g3307 483 SMART tpr_5 176 209 IPR019734 GO:0005515
Mal5g3307 483 PANTHER PROTEIN POLLENLESS 3-LIKE 2 5 480 - -
Mal5g3307 483 PANTHER PROTEIN POLLENLESS 3-LIKE 2 5 480 IPR044961 -
Mal5g3307 483 MobiDBLite consensus disorder prediction 1 32 - -
Mal5g3307 483 Pfam Tetratricopeptide repeat 186 244 - -
Mal5g3307 483 Gene3D Tetratricopeptide repeat domain 49 273 IPR011990 GO:0005515
Mal5g3307 483 ProSiteProfiles TPR repeat profile. 176 209 IPR019734 GO:0005515
Mal5g3307 483 SUPERFAMILY TPR-like 59 234 IPR011990 GO:0005515
Mal5g3307 483 Coils Coil 89 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3307 Mal-Chr5 96477656 96480096 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3307 - - gmx:100788369 721.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3307 5 96477656 96480096 Mal5g3307 5 96477656 96480096 ECH