Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3306 ATGTCAAAGCGAAACTCCGTCATTGTTCTCTCATCGGATGAGGAAGAAAATGCTCCCAAAACCCGTTCATTGAGTTCAAACCGTACAAATCCCAAGCCCAAACCCAAGTTGAGTTCAACGGGCTCCAGAGGAAGAAAGAAAGCCCGTGTTTCCACTTCTACGCCTCGTCTCTCTAAGCTCTATGAGATAAACTTGTTTGATGATGACTTCAATGAAGTGTTTACCGGGTCAAAGGTATTCGCCGCTGGTACTCAAAGGAGCACTGCAGAGGAGCTATGGGTTGATAAATACAAGCCCCATTCGCTGGAAGAGCTTGCTGTTCACAAGAAAAAGGTTGAAGAAGTTAAGACGTGGTTTGAAGAAAGGTTGAAACCTTCCAAGGGTGTCTACAGAAATAATAATGTTCTTGTCGTCAGTGGGCAGGCAGGAGTTGGAAAATCTGCTGCTATTCATGTAATTGCTTCTCATCTGGGTGCGACAGTATGTGGATGGAACACACCTACACCTGTAATTTGGCAAGAGCATCTTTATAACTCTGGAACAGAGACAAAATACACTTCCAAGTTGGATGAATTTATAAGTTTTGTTGAGAGAATACGGACATTTGGATTAATACCAACTTCCTTTGCTGGGGAGTCAAAGCCTTCCATCATATATTTAATAGATGATCTTCCCATGATGCATAGTAAAGCTGCTTTAGGAAGACTTAAAAATTGTTTAAACCTTTTGGTCCACACAACTCAGATACCCACAGCCATATTGGTCACAGATTACGGCAATACTGATTCAGCAGATTATAATGCACGGTCCATGGAAGAACTTAAGACATCTCTAGAAAGTTCTGGGGCTTGTAAGATCACATTCAATCCAATTACAGTTAATTCTATTAAGAAGATACTTTTTAGAATATGTCAAATGGAGCAGTGTGATGTGACCGCTGACAATGTTGATCTAATAGCAAAAGCAAGTGGAGGTGACGTTAGACATGCAATTACTTCTCTACAGTTTTTCTGTCTGAACCCGAATCAAGTGCATTCTTTGTCTCAATCTACTCGCAGTCCTCATGCATTAAAAGAGGAAAGTAATAAACATGTTGAATTGGACGATGGATCTTCCTTGTACTTTGGCAGAGATGAGACACTGTCTTTATTTCACGCCTTAGGGAAATTTTTGCACAATAAGAGGGAGACTGGAGTTGCAGTAGAATATGATCAAAATGGCTTTCTCATACACGAAAGATTTTCAAGATTACCTTTAAAAATGGATGTCCCTGAGAAGATTCTTTGTCAGGCCCATGTGCAACCTGGTCCAGTTGCTGATTTTCTACATGAAAATGTTCTAGATTTTTTAAATGATGAGGCAGTAGAGGATGCGTGGATTTTGTCTTCATATCTAGGTGATGCTGATATCCTTCTTGCTAAGCTTCGGGGAATGGTAGCTAGTTATAACGAGGCAGAGAGTATTTTACAGTCAGCTGCTGCATCAATTGCTGTTCGGGGGGTGCTATTTGGAAACTCTTGTCCACTTTCCTCCAGGTGGCATGCAATCCGTCGACCAAAGCTCTGGCAGGTTGAGAAAGAATCATCATACCACAAGAATGAGATGTTACGGCAGAGAATCCCTGCTTGTAATCAGCTGAGTTCTTATCATATGTCAATTATGGCCACAGAATACATGCCTATGCTCAAATTGCTTGGAAATAGGGTTGGCAGTGGATATGATGAACTACATCACAAATCAGTGCAGAACGATACAGAAAACTTTGATATTGACAAAATGAATTTAGATGGTGAACCAATGGAGATTTCCGATGACGACATAGAAGATTGGTAG 1833 0.4086 MSKRNSVIVLSSDEEENAPKTRSLSSNRTNPKPKPKLSSTGSRGRKKARVSTSTPRLSKLYEINLFDDDFNEVFTGSKVFAAGTQRSTAEELWVDKYKPHSLEELAVHKKKVEEVKTWFEERLKPSKGVYRNNNVLVVSGQAGVGKSAAIHVIASHLGATVCGWNTPTPVIWQEHLYNSGTETKYTSKLDEFISFVERIRTFGLIPTSFAGESKPSIIYLIDDLPMMHSKAALGRLKNCLNLLVHTTQIPTAILVTDYGNTDSADYNARSMEELKTSLESSGACKITFNPITVNSIKKILFRICQMEQCDVTADNVDLIAKASGGDVRHAITSLQFFCLNPNQVHSLSQSTRSPHALKEESNKHVELDDGSSLYFGRDETLSLFHALGKFLHNKRETGVAVEYDQNGFLIHERFSRLPLKMDVPEKILCQAHVQPGPVADFLHENVLDFLNDEAVEDAWILSSYLGDADILLAKLRGMVASYNEAESILQSAAASIAVRGVLFGNSCPLSSRWHAIRRPKLWQVEKESSYHKNEMLRQRIPACNQLSSYHMSIMATEYMPMLKLLGNRVGSGYDELHHKSVQNDTENFDIDKMNLDGEPMEISDDDIEDW* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3306 610 MobiDBLite consensus disorder prediction 22 37 - -
Mal5g3306 610 Pfam Rad17 P-loop domain 89 266 - -
Mal5g3306 610 Gene3D - 294 352 - -
Mal5g3306 610 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 91 339 IPR027417 -
Mal5g3306 610 MobiDBLite consensus disorder prediction 1 53 - -
Mal5g3306 610 Gene3D - 90 273 IPR027417 -
Mal5g3306 610 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 40 610 IPR004582 GO:0006281
Mal5g3306 610 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 40 610 - -
Mal5g3306 610 CDD HLD_clamp_RFC 291 336 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3306 K06662 - gmx:100799826 894.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3306 5 96468950 96476627 Mal5g3306 5 96468950 96476627 ECH