Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3254 ATGTCGGAGTCAAACTCAAACACAAGAACTCAAACAAAAACATGGCTTTTCACACCATTCATAGCTATAATTCTCCCAGTTATTGTTGCATCAGCGGTTCTCTACCGGCTCGACCCATTCGACCCGGGTCATCTCCCGGTCAACGAACTAAGCCGGTCAACTTTAACCGTTCCCTTACGTAACAACAACATGAGATTAGGATCTGAAAACGTTGGAGAGGGACAAGTGTTGGGACCTGAAGATTTGGTATATGATGCTGATATGGGTGTTGTTTATACTGGTTGTGAAGATGGGTGGATTAAGAGAGTTACGGTGAATGAATCGGTGGTTGATACGGTGGTTGAAAATTGGGTCAACACCGGTGGAAGACCTCTTGGGCTTGCTTTTGATTCCAATGGTGATCTCATAGTTGCAGATGCTGATAAGGGACTACTAAGAATAACAAGAGAAAAGGAGATTGAAGTACTTGTGACTGAAATTGAGGGCTTAAAATTCAAATTAACAGATGGGGTTGATGTAGCACATGATGGTACTATTTATTTCACTGATGCTTCATCCAAATACTCAGTCAAGGATTCTATCTTAGATATATTAGACGGCAAACCTAATGGTAGATTTTTGAGTTATGATCCATCAACAAAAAAGACAACCCTACTAATCAAGGACCTCTACTTTCCTAATGGAGTTGCAATCTCACCAGATCAACATTTTGTGGTATTTTGTGAAACTGTTATGATGAATTGCAAGAAATATTACATACAGGGCCCAAAAAAAGGAAGCACAGAAAAATTTTGTGACCTCCCTGGCATGCCTGATAACATTCATTATGATGGACATGGGCAGTACTGGATTGGATTAGCCACGGCCTTTTCTCCTGAGCTAGATATAATGCTCAAATACCCTTTCATTAGGAAGGTTTTGGCAATCATTGCAAAAAAAGTTCCTAGTTTGAATTTGTCAAAGAATGGAGGAGTTATTGCTGTGGATTTGGAGGGAAAACCTACTACACACTATTATGATCCAAAATTATCATTGACTGCTGGGATTAAGATTGGGAATCACATGTATTGTGGTTCCATTTTATACCATTTTGTTATACGTCTTGATATTGAGAAGTATCCTGCTCTCCCCACAATTTAA 1140 0.3947 MSESNSNTRTQTKTWLFTPFIAIILPVIVASAVLYRLDPFDPGHLPVNELSRSTLTVPLRNNNMRLGSENVGEGQVLGPEDLVYDADMGVVYTGCEDGWIKRVTVNESVVDTVVENWVNTGGRPLGLAFDSNGDLIVADADKGLLRITREKEIEVLVTEIEGLKFKLTDGVDVAHDGTIYFTDASSKYSVKDSILDILDGKPNGRFLSYDPSTKKTTLLIKDLYFPNGVAISPDQHFVVFCETVMMNCKKYYIQGPKKGSTEKFCDLPGMPDNIHYDGHGQYWIGLATAFSPELDIMLKYPFIRKVLAIIAKKVPSLNLSKNGGVIAVDLEGKPTTHYYDPKLSLTAGIKIGNHMYCGSILYHFVIRLDIEKYPALPTI* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3254 379 PANTHER PROTEIN STRICTOSIDINE SYNTHASE-LIKE 5-LIKE 14 370 - -
Mal5g3254 379 Gene3D - 62 366 IPR011042 -
Mal5g3254 379 SUPERFAMILY Calcium-dependent phosphotriesterase 63 371 - -
Mal5g3254 379 Pfam Strictosidine synthase 169 256 IPR018119 GO:0009058|GO:0016844
Mal5g3254 379 Pfam Strictosidine synthase-like, N-terminal 68 103 - -
Mal5g3254 379 PANTHER STRICTOSIDINE SYNTHASE-RELATED 14 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3254 Mal-Chr5 95572721 95577664 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3254 - - gmx:100778397 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3254 5 95572721 95577664 Mal5g3254 5 95572721 95577664 ECH