Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3252 ATGAATAACATCTTTAAGATCATGCTTTGGACTCGTTCTCTAACCCACTTCAGATCAACCCACCACACCTACTCACGTAAAATTTCAAACTTTTCCAAGGAACATGATCCAGGATCATGTGAATCAATGGAGGGTCTACTTCATTGCTCTGCAAATTCTGCTCCTTTGTCTCCTATCAACTTCTTGGAGAGAGCAGCAAAGGTTTGTAGAGACAGAACATCACTTGTGTATGGTTCTTTGAAGTATAGTTGGGGTCAAACTCATCAACGTTGTCTCAAACTTGCTTCTTCTCTTACCCAATTGGGGATTTCCCGTGGAGATGTGGTTGCCACACTAGCACCTAATGTCCCTGCAATGTATGAGCTGCATTTCGCAGTACCAATGGCCGGAGCCATTCTTTGTACTCTTAATTCACGCCTAGATGCAACTATGGTGTCAGTCCTGCTCGAGCATTCGCAAGCAAAGATCCTTTTTGCAGACTACCAACTACTTGAAATTGCACAAGGAGCATTGGACTTACTTCGCGAAAAAGGAACAAAATCGCCAATTATAGTCTTAGTTACTGATTCCGATTTCCCATCTATGATTGGCATTACATCAACAAGTTATGCGTATGAGAAGCTAATCGATGTTGGCCAAAATGGTTTTAACATAGTGAAGCCACAAAGTGAATGGGATCCTATAAGTATAAATTACACCTCAGGCACCACATCTAGGCCTAAAGGAGTTGTCTATAGTCATAGAGGTGCTTATCTAAACTCTTTAGCAACAGTTCTACTCTTTCAAATGGACATCTTTCCGGTTTATCTTTGGAATGTTCCGTTGTTCCATTGCAACGGTTGGTGTCTCCCTTGGGGAGTGGCAGCACAATTTGGAACAAATATTTGTCTAAGGAAAGTCTCTCCACAGAACATATTTGATAACATAATTCAGCATAAGGTGACACACATGGGAGGAGCTCCTACAGTACTTAACATGATTTTGAATTCTGCGTCGACTCATAGAAAGCCACTCAATCACAAGGTTTTAGTGATGACAGGAGGTTCACCTCCACCACCACAGATTCTTTCCAAGATGGAAGAAATCGGTTTTAGTGTTTCTCACCTCTACGGCTTGACAGAAACGTACGGTCCAGGGAGTTTTTGTGCATGGAGACCTGAGTGGGACACATTGCCTCCTGAAGAAAGATCGAAGATGAAAGCTAGGCAAGGTGTGCCGCATGTGGCATTGGAGGAAATTGATGTTAAAGATTCTGCAACTATGGAAAGTGTTCCAGCTGACGGAAAAACGGTTGGCGAGATAATGTTTAGAGGGAATACAGTGATGAGTGGATATTTTAGAGATTTGAAAGCAACAGAAGAAGCTTTCAAAGATGGCTGGTTTCATAGTGGGGATTTAGCTGTGAAACACTCTGATGGTTACATAGAAGTTAAGGATAGATTGAAGGATATAATAGTCTCTGGAGGAGAAAACATTAGCTCGGTCGAGGTAGAAACTGTTTTATATAGTCATCCGGCTGTTCTTGAGGCCGCAGTTGTTGCACGACCGGATGATCATTGGGGTCAAACTCCTTGTGCATTTTTAAAGCTGAAAGACGGGTTTGATGCAAATGTTCAAGAAATAATCGCCTTTTGTAGGGAACGTTTGCCTCATTACATGGCTCCTAAAACCGTAATTTTTGTAGATATGCCAAAGACTTCAACAGGTAAGATACAAAAGTATATTCTAAGGGAGAAAGCCAAGGCTTTGGGAAGTATATCTATTTCCAGCCCCTCTGATTGTGAAAAAGTTGTAGCTGATTGCTCAAGTAAGGTTAGGGAATAA 1824 0.4172 MNNIFKIMLWTRSLTHFRSTHHTYSRKISNFSKEHDPGSCESMEGLLHCSANSAPLSPINFLERAAKVCRDRTSLVYGSLKYSWGQTHQRCLKLASSLTQLGISRGDVVATLAPNVPAMYELHFAVPMAGAILCTLNSRLDATMVSVLLEHSQAKILFADYQLLEIAQGALDLLREKGTKSPIIVLVTDSDFPSMIGITSTSYAYEKLIDVGQNGFNIVKPQSEWDPISINYTSGTTSRPKGVVYSHRGAYLNSLATVLLFQMDIFPVYLWNVPLFHCNGWCLPWGVAAQFGTNICLRKVSPQNIFDNIIQHKVTHMGGAPTVLNMILNSASTHRKPLNHKVLVMTGGSPPPPQILSKMEEIGFSVSHLYGLTETYGPGSFCAWRPEWDTLPPEERSKMKARQGVPHVALEEIDVKDSATMESVPADGKTVGEIMFRGNTVMSGYFRDLKATEEAFKDGWFHSGDLAVKHSDGYIEVKDRLKDIIVSGGENISSVEVETVLYSHPAVLEAAVVARPDDHWGQTPCAFLKLKDGFDANVQEIIAFCRERLPHYMAPKTVIFVDMPKTSTGKIQKYILREKAKALGSISISSPSDCEKVVADCSSKVRE* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3252 607 Gene3D - 482 584 IPR045851 -
Mal5g3252 607 Pfam AMP-binding enzyme 63 487 IPR000873 -
Mal5g3252 607 PANTHER ACYL-ACTIVATING ENZYME 22 586 - -
Mal5g3252 607 SUPERFAMILY Acetyl-CoA synthetase-like 47 582 - -
Mal5g3252 607 CDD ttLC_FACS_AEE21_like 54 578 - -
Mal5g3252 607 Pfam AMP-binding enzyme C-terminal domain 496 570 IPR025110 -
Mal5g3252 607 PANTHER ACYL-ACTIVATING ENZYME 2-RELATED 22 586 - -
Mal5g3252 607 Gene3D - 45 481 IPR042099 -
Mal5g3252 607 ProSitePatterns Putative AMP-binding domain signature. 230 241 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3252 Mal-Chr5 95531799 95534791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3252 119 587 Miscellaneous Gene Families AT1G20560 63.057 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3252 - - gmx:100500429 979.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3252 5 95531799 95534791 Mal5g3252 5 95531799 95534791 ECH