Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3203 ATGGGGTTTATGCAGCTCTTGTATGTTGCTTCTTTGCCAGTTTTGAAAGTATTACTCATCACTGCACTTGGTTTGTTTCTTGCAATTGATCAAATTGATGTGTTGGGAGCAGATGCAAGGATGAGAGTGAATAATCTTGTGTTTTATGTGTTTAATCCATCACTGGTTGGTAGCAATTTGGCTGAAACATTAACCTCTGATAATGTTCTTAGTTTGTGGTTCATGCCAGTAAATGTTCTTAGCACATTCATATTGGGTTCAGCTTTAGCATGGTTTGTGATTAAGATCACAAGACCTCCAAAGCACTTGGAAGGTCTTATATTGGGTTGCTGTTCTGCAGGAAATTTAGGAAACTTGCCTATAATCATAATTCCAGCTATTTGTAAGGAGAAAGGAAGTCCTTTTGGAGACCCTGTTCTCTGCCATAAATATGGGATGGCTTATGTTTCACTTTCTATGGCGATTGGAGCAGTTTTACTATGGACATATGTTTATAACATAATGAGAATTTCATCAACTAGAGCCAAATTGATGACTTCAGGGGTGATATCAGAATCACAACAAGAAACCCTTAACCCTGCAAAAGATACCCCAGATGATGCATATACTTTACTACTTCCAAGTACAGAATTTCAGGAAAAGGTTTCATTCTCAAATAAAATTAAGCGACATTTGAGGAATATTTCAAACAACATCAATTTCAAAACCATTTTTGCACCATCAACCATTGGAGCAATTGCTGGATTTTGCATTGGTGTTATCAACCCAATACGTAAGTTAATGATTGGCAATAATGCTCCATTACATGTGGTTGAAGACTCTGCTTCCATGTTGGGTGAAGCAGCCATCCCAACTGTCACACTCATTTTGGGTGCAAACCTCCTTAAAGGTTTGAAGGGAACAAGTACTCCAGTGTGGACAATTGTGGGCATTATAGCAGTAAGATATATTTTTCTGCCTATAATAGGTGTCATAGTGGTCCAAGGGGCAATCAAATTAGGTTTGGTGCAACCAGATCCTTTATATCAGTTTGTCCTTCTACTTCAATATGCAGTTCCACCAGCTATGAATATAGGAACTATGGCTCAGTTGTTTGGATCTGGTGAAAGTGAATGCTCTGTGATTATGTTATGGTCATACGCTTTGGCTTCAATTGCAGTCACCCTTTGGTCAACCTACTTCATGTGGCTAGTTATTTGA 1200 0.3842 MGFMQLLYVASLPVLKVLLITALGLFLAIDQIDVLGADARMRVNNLVFYVFNPSLVGSNLAETLTSDNVLSLWFMPVNVLSTFILGSALAWFVIKITRPPKHLEGLILGCCSAGNLGNLPIIIIPAICKEKGSPFGDPVLCHKYGMAYVSLSMAIGAVLLWTYVYNIMRISSTRAKLMTSGVISESQQETLNPAKDTPDDAYTLLLPSTEFQEKVSFSNKIKRHLRNISNNINFKTIFAPSTIGAIAGFCIGVINPIRKLMIGNNAPLHVVEDSASMLGEAAIPTVTLILGANLLKGLKGTSTPVWTIVGIIAVRYIFLPIIGVIVVQGAIKLGLVQPDPLYQFVLLLQYAVPPAMNIGTMAQLFGSGESECSVIMLWSYALASIAVTLWSTYFMWLVI* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3203 399 Pfam Membrane transport protein 12 390 IPR004776 GO:0016021|GO:0055085
Mal5g3203 399 PANTHER - 1 398 IPR045033 GO:0080162
Mal5g3203 399 PANTHER AUXIN EFFLUX CARRIER FAMILY PROTEIN 1 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3203 Mal-Chr5 93970214 93973650 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3203 K24139 - gmx:100810166 593.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3203 5 93970214 93973650 Mal5g3203 5 93970214 93973650 ECH
Mal6g0862 6 12915147 12918898 Mal5g3203 5 93970214 93973650 PCT