Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3056 ATGGTAATAGTTGCATTATCCTCTCCCATCCCAGGTAGGAGGAACCTCTTCTCCTCCCTACCACCCAACACCCCCTCCTCTTCATCCGCCACCCCACGTCCGCCTATCCCCGTTCCCAAATACCCCCCACCTCGCAAATCACACCCCCCACCACCACCAAACCCAAAAAACCCCGCCCTCAAACACCACCGCAACTCCAAATACTACAAACCCATAACCCACACCACCACCATCCCCTCCTCCGACGACCGCTCCGTCATCATCGGCGACTCCGGCGTCTCCTACCTTCTCCCCGGAGCACCCTTCGAGTTTCAATTCAGCTACTCCGAAACTCCAAAAGTGAAACCAATTGCTATCCGTGAACCGGCTTTTTTACCGTTTGCACCCCCCACAATGCCGAGGCCGTGGACCGGTAAAGCGCCGTTGAAGAAGTCGAAGAAGAATATTCCGCTTTTTGATTCGTTTAATCCTCCTCCGGAAGGGATGAAAGGTGTTAAGAAAGTTGAAATGCCCGGTCCGTTTCCGGTTGGGAAGTTTCCGGAAGAGGGGATGAGTAGAGAGGAGATACTCGGTGAGCCGCTTAAGAAATGGGAGGTGCAAATGCTTGTTAAGCCTATGATGTCTGATAATCGCCAAGTTAATCTCGGAAGGGATGGATTAACGCATAACATGTTGGAGTTGATACATTCACATTGGAAGCGTCGCCGTGTCTGTAAAATTCGTTGTAAAGGTGTTCCTACTGTTGACATGGATAACGTTTGCCGCCACATTGAGGATAAAGCAGGGGGGAAAATAATTCATCGAGCTGGCGGTGTAGTTTATCTTTTCCGTGGAAGAAATTACAACTACCGTACTCGTCCACAGTATCCAGTGATGCTCTGGAAGCCAGCTGCTCCTGTTTATCCAAAACTTCTACAAGATGCTCCAGAAGGATTAACAAAAGCTGAAGCAGATGAATTACGGATTAAAGGGAAAAACCTGTTGCCAATATGTAAATTAGCCAAAAATGGAGTATATACAACGCTTGTAAAGGATGTCAGAAATGCTTTTGAAGCAAGTCCTTTGGTCAAAATTGACTGCAGGGGATTGGATCCTAGTGATTACAAGAAATTAGGTGCCAAGCTTAAGGATTTGGTTCCTTGTGTGCTATTGTCTTTCGATGATGAACAAATATTGATTTGGAGGGGCAAAGACTGGAAATCAATGTACCCTGAAGCTCCGGCTTTTCCTTCTGCTGAAGCTGGCATTACAAGGAATTTGGACAATATAGGCAAGGCTGATGATAATCAATCGAAGCATATCGACAACATGGTCAAGGCAAGCCCAAAAATGTTATCCCTCTGGAAAACTGCAATTGAGTCAAACAAAGCCTTGTTGCTAGAAGAATTTAATATTGGTCCTGATGCTCTCTTGGAGAAGGTAGAAGAATTTGAGGGTATTTCACAGGCCACAGAGCACTCCTATCCAGCATTTACTTCTTCAACTGAAAATGCTTTTGAAGGTTCAAATGTATACCTTCAAGATGGTACAGAAGACAACTATTCAAGTGATGCCTTAGAGGATGTTGATGATTATGATAGCAACGATGATGACGAAGATGATTATGATTACTACAATGATGGCGAAGACGATGAGTTTAATGATATAGTGGATACATCAGCTCTACCCGGATCGTTACCAGTTGATTTGCTTGTTGATAAGCTCAAACTAAGACAAAAGGAGTAA 1725 0.451 MVIVALSSPIPGRRNLFSSLPPNTPSSSSATPRPPIPVPKYPPPRKSHPPPPPNPKNPALKHHRNSKYYKPITHTTTIPSSDDRSVIIGDSGVSYLLPGAPFEFQFSYSETPKVKPIAIREPAFLPFAPPTMPRPWTGKAPLKKSKKNIPLFDSFNPPPEGMKGVKKVEMPGPFPVGKFPEEGMSREEILGEPLKKWEVQMLVKPMMSDNRQVNLGRDGLTHNMLELIHSHWKRRRVCKIRCKGVPTVDMDNVCRHIEDKAGGKIIHRAGGVVYLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLLQDAPEGLTKAEADELRIKGKNLLPICKLAKNGVYTTLVKDVRNAFEASPLVKIDCRGLDPSDYKKLGAKLKDLVPCVLLSFDDEQILIWRGKDWKSMYPEAPAFPSAEAGITRNLDNIGKADDNQSKHIDNMVKASPKMLSLWKTAIESNKALLLEEFNIGPDALLEKVEEFEGISQATEHSYPAFTSSTENAFEGSNVYLQDGTEDNYSSDALEDVDDYDSNDDDEDDYDYYNDGEDDEFNDIVDTSALPGSLPVDLLVDKLKLRQKE* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3056 574 SUPERFAMILY YhbY-like 193 287 IPR035920 -
Mal5g3056 574 MobiDBLite consensus disorder prediction 1 62 - -
Mal5g3056 574 Gene3D - 193 289 IPR035920 -
Mal5g3056 574 MobiDBLite consensus disorder prediction 27 58 - -
Mal5g3056 574 MobiDBLite consensus disorder prediction 506 552 - -
Mal5g3056 574 Pfam CRS1 / YhbY (CRM) domain 312 395 IPR001890 GO:0003723
Mal5g3056 574 Pfam CRS1 / YhbY (CRM) domain 196 277 IPR001890 GO:0003723
Mal5g3056 574 MobiDBLite consensus disorder prediction 12 26 - -
Mal5g3056 574 PANTHER CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC 11 569 IPR044599 GO:0000373
Mal5g3056 574 ProSiteProfiles CRM domain profile. 192 288 IPR001890 GO:0003723
Mal5g3056 574 Gene3D - 312 406 IPR035920 -
Mal5g3056 574 ProSiteProfiles CRM domain profile. 310 406 IPR001890 GO:0003723
Mal5g3056 574 MobiDBLite consensus disorder prediction 514 549 - -
Mal5g3056 574 PANTHER CRS2-ASSOCIATED FACTOR 2, CHLOROPLASTIC 11 569 - -
Mal5g3056 574 SUPERFAMILY YhbY-like 312 403 IPR035920 -
Mal5g3056 574 SMART CRS1_YhbY_2 312 395 IPR001890 GO:0003723
Mal5g3056 574 SMART CRS1_YhbY_2 194 277 IPR001890 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3056 Mal-Chr5 89990605 90002001 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3056 - - gmx:100801953 779.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3056 5 89990605 90002001 Mal5g3056 5 89990605 90002001 ECH