Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3054 ATGGCAACAAAGAAAATTCAAGAAAAAGAAGTAGAAGCTCCCATCCATGGAGACATCTTAGAGGCCACACTTTCGTACGTGCCACTCATTTACTTGGTGCCAGCCAGTCACGTGTCAAAGCAATGGAGCCATGCGGTATTGAGCTCTCTCCGCCACGTCAACCCCGTGAAGCCGTGGCTCACGGTTCACATTCAAAACCCCCGGACTCCCCACATGACCGCAACATATGCCTACGACCCACGCTCCCTAACGTGGATCCAAATTCACGTGCCACATATCAATCTCACCTCTGTTGTAAGATCATCACACTCCACGCTCCTCTACACACTTTCTCCCACTGAATTCTCCTTCTCTTTTGATCCGCTCCACCTCACGTGGAACCACGTGCCATCACCACGTGTTTGGCGTGTGGATCCCATTGTTGCACGTGTGGGAAAGTGCATTGTCGTCGCTGGCGGGGTGTGCGACTTTGAGGACGATCCTTTAGCGGTTGAGATATACGACATGGAGTCTCGTGATTGGATCCAGTGCGAACCGATGCCTGAGATGATGAAGGATACAACATCGTCGACGTGGTTCTCTGTTGCTGTTGTCAATGAGTTTATGTATGTGACGGAGAAAAATTCAGGTGTGATGTACTCTTTTGATTGTAAAATGATGATGTGGCAAGGACCCTACGATTTCCGAGGGGAAGAGAGTATATTATATTATGAGACTGGAACAATAAAAAATCGCTTGGTGGTTGTGGGAATAGTAGGTGATGCGGAGAACGTGAAAGGTGTAAAAGTGTGGGAGGTGAAAGAGGAATTAGGATTAGGGTTAAAAATGGAAAAATTGGGTGAGATGCCGAGCAAAATGGTGAAGAAACTGAGAGGTGACAGTGGGAATGAGTTGTTGAATTCGATTAAATTGATTTCAATAGGAGATTTGTTGTATGTTTATAATCCGTCGGAACCAGAGGAGATGGTGGAGTGCGAGGTTTCTAAGAGAGGAGGGTGTGAGTGGTGGAGTGTGAGGAATGCGGTAATGAATGACGCGGTGCGAATGGGAAGAATTGTATTGTGTGGTGGTGATGTGGGTTTGGAGGATTTGAAGAGTGCAGTTTCGCGGCATTGTAAGTTTGAATTGAAATAA 1134 0.4674 MATKKIQEKEVEAPIHGDILEATLSYVPLIYLVPASHVSKQWSHAVLSSLRHVNPVKPWLTVHIQNPRTPHMTATYAYDPRSLTWIQIHVPHINLTSVVRSSHSTLLYTLSPTEFSFSFDPLHLTWNHVPSPRVWRVDPIVARVGKCIVVAGGVCDFEDDPLAVEIYDMESRDWIQCEPMPEMMKDTTSSTWFSVAVVNEFMYVTEKNSGVMYSFDCKMMMWQGPYDFRGEESILYYETGTIKNRLVVVGIVGDAENVKGVKVWEVKEELGLGLKMEKLGEMPSKMVKKLRGDSGNELLNSIKLISIGDLLYVYNPSEPEEMVECEVSKRGGCEWWSVRNAVMNDAVRMGRIVLCGGDVGLEDLKSAVSRHCKFELK* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3054 377 PANTHER KELCH REPEAT-CONTAINING F-BOX-LIKE PROTEIN 3 368 - -
Mal5g3054 377 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 3 368 - -
Mal5g3054 377 SUPERFAMILY Kelch motif 58 268 IPR015915 GO:0005515
Mal5g3054 377 Gene3D - 65 287 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3054 Mal-Chr5 89956035 89957168 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3054 - - adu:107481346 449.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3054 5 89956035 89957168 Mal5g3054 5 89956035 89957168 ECH
Mal6g2049 6 46962009 46963121 Mal5g3054 5 89956035 89957168 PCT