Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3001 ATGAAGTTTATGAAACTAGGATCTCGTCCTGATACCTTCTACACTGAAGACTCAGTAAGGTCCATCTCTTCTGAAGTTTCAAGTGACCTCATAATTCAAGTGAAAGGAACTAGATATCTTCTTCATAAGTTTCCACTGCTATCAAAATGTTTGCACCTGCAAATATTATGTTTAGAGTCACCCGATTCTCCAAATCATCAAATAGTACAACTTCCCGATTTTCCGGGGGGAGAAGAAGCATTTGAACTATGTGCAAAATTCTGCTATGGAATCACAATCACTTTAAGTCCTTACAACATTGTATCCGCAAGATGTGCCGCGGAATATTTACAAATGACAGAAGATGCGGAAAAGGGTAACTTGATTTACAAGCTTGAAGTTTTCTTCAATTCTTGCATACTTCATGGTTGGAAAGATTCAATTAAGACACTACAAACCACAAAAGCATTGTCTTTATGGTCAGAGGATTTGTCAATTACAAATAGATGCATTGAAGCAATTTGCTCAAAAGTCTTAAATAGGGTTAGAAATGAAGATGTTATATCTTGTAGTGGAACAGAAAGTTTGAGAGATAAATCAATAAGAAAAAGATGGTGGGGTGAAGATTTAGCAGAATTGAAAATTGATCTTTATTGGAGAATCATGATTGCTTTAAAATCTGATGTAAAGTTACCTTCAAATCTCATTGGTGATGCTTTGAAAATTTATGCATCTAAATGGCTACCAAAAATTGGTTCTGATTTTAGTTCTGATTCAAGAAAGCAATGTATAGTTTTGGAATCAATAGTTAATTTGCTACCATGTGAAAAAGGTGCTGTTTCTTGTAACTTTCTTCTTAAACTTTTGAAAGTAGCAAACATTTTGAGTGCTTCTTCATCTTCAAAGATGGAATTGGTTAAAAGGGTTGGAATTCAATTGGAGGAAGTAACAGTGAATGATCTTATAATGGTTTGTGATGTGGATTTGGTGATGAACATTTTGGAACAGTTTTTGTCTCAATTAAGTCAAAGTCCACAAACTAGTCCTCAAAGATCAAGGTTGGATTTTGAAAGGAGGAGGTCACGTTCAGCTGAGAATGTTGATTTTGAATTGCAAGAGAGTAGAAGATCTTCATCAGCTTCACATAGTTCAAAATTGAAAGTGGCTAAGCTTGTTGATAAGTATCTTCAAGAGGTTGCTAAGGATGTGAATTTGCCTCTGGATAAATTTGTTGCTATTGCTGAAACTGTTCCTGAATTTGCAAGATGTGATCATGATGATCTATACTGTGCTATTGATACTTATCTCAAGGCTCATCCAGAACTCAACAAAACCGAAAGGAAAAGACTATGTAGAATTCTAGATTGCAAAAAACTCTCCATTTCATCATGTATGCATGCTGCACAAAACGAGCTACTTCCACTAAGACTTGTTGTCCAAGTTCTCTTCTTTGAGCAAGCTAGAGCAGCATCAAATGGTGGCAAATTCACCAACATATCAAGCAACATGAAAGCATTACTCACTTCTTATGGAATTGACCCATCAAAACATGCAACACAATTAAGCACAACTACAAGCATACAAGGTGATGATAAGTGGAGTGTTAATGGATTCAAGTCACCAAAATCAACAAAGAACACAACTCTTAAGATGAAACTAGCTGAGGATGATTTAGATGAGAATAATGATGTGGCAAGCAATCGAATTGGAAGAAGTTCTAGATTTAAAGGTTTTTGTTCTCTTCCTACTAAGCCTAAAAGAATGTTTAGTAAGTTGTGGTCTACCAATAGAAGCACAACTCAAAAGAATTGA 1791 0.3529 MKFMKLGSRPDTFYTEDSVRSISSEVSSDLIIQVKGTRYLLHKFPLLSKCLHLQILCLESPDSPNHQIVQLPDFPGGEEAFELCAKFCYGITITLSPYNIVSARCAAEYLQMTEDAEKGNLIYKLEVFFNSCILHGWKDSIKTLQTTKALSLWSEDLSITNRCIEAICSKVLNRVRNEDVISCSGTESLRDKSIRKRWWGEDLAELKIDLYWRIMIALKSDVKLPSNLIGDALKIYASKWLPKIGSDFSSDSRKQCIVLESIVNLLPCEKGAVSCNFLLKLLKVANILSASSSSKMELVKRVGIQLEEVTVNDLIMVCDVDLVMNILEQFLSQLSQSPQTSPQRSRLDFERRRSRSAENVDFELQESRRSSSASHSSKLKVAKLVDKYLQEVAKDVNLPLDKFVAIAETVPEFARCDHDDLYCAIDTYLKAHPELNKTERKRLCRILDCKKLSISSCMHAAQNELLPLRLVVQVLFFEQARAASNGGKFTNISSNMKALLTSYGIDPSKHATQLSTTTSIQGDDKWSVNGFKSPKSTKNTTLKMKLAEDDLDENNDVASNRIGRSSRFKGFCSLPTKPKRMFSKLWSTNRSTTQKN* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3001 596 PANTHER OS12G0117600 PROTEIN 1 592 IPR043454 -
Mal5g3001 596 ProSiteProfiles NPH3 domain profile. 197 481 IPR027356 -
Mal5g3001 596 Pfam NPH3 family 198 457 IPR027356 -
Mal5g3001 596 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 1 592 - -
Mal5g3001 596 Gene3D Potassium Channel Kv1.1; Chain A 14 118 IPR011333 -
Mal5g3001 596 SUPERFAMILY POZ domain 20 114 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3001 Mal-Chr5 88351978 88354942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3001 13 487 EF-hand Containing Proteins AT3G44820 33.898 2.35e-79 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3001 - - gmx:100798413 834.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3001 5 88351978 88354942 Mal5g3001 5 88351978 88354942 ECH