LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal5g2891	ATGAATCCATTTTCTTCATCCACGCGTTTGAGGGACATGATTCGGGCCATACGTGCTTGCAAAACTGCGGCAGAGGAACGTGCTGTTGTAAGAAAAGAATGTGCTGCCATTCGTGCTTCAATTGATGAAAATGACCAATACTGCAGGCATCGGAATATGTCCAAGCTAATGTTCATCCACATGCTTGGCTACCCCACACATTTTGGTCAAATGGAATGCCTCAAGTTGATATCATCTCCTGGATTTCCAGAGAAGAGAATAGGTTACCTTGGCCTTATGTTGCTTGTTGATGAAAGACAAGAGGTTCTAATGTTGGTCACCAATTCTTTGAAACAAGATCTCAATCATACAAATCAGTATATAGTGGGACTTGCTCTTTGTGCTTTAGGGAACATTTGTTCAGCAGAAATGGCTCGTGATCTTGCACCAGAGGTTGAGAGGTTGCTGCAATTTCGGGATCCAAATATTCGGAAGAAGGCAGCTTTATGCTCTATAAGAATCATAAAGAAAGTCCCAGACTTAGCTGAAAATTTTGTAAATCCTGCTACTAACTTACTGAGGGAGAAGCATCATGGAGTTTTGATCACCGGGGTTCAGCTTTGTACAGAGCTGTGTAAAATTAGCTCAGAAGCTCTTGAACATATTAGAAAGAAATGCACAGAAGGTTTGGTGAGAAGTCTAAAGGATCTAGCAAACAGTTCTTATTCACCAGAGTATGATATTGCTGGCATTACAGACCCTTTTCTCCATATCAAATTGCTAAGACTGTTGCGGGCATTGGGCGAAGGTGATGCAGATGCTAGCGACTCTATGAACGACATACTTGCCCAGGTGGCTACAAAGACCGAGTCAAACAAAGTTGCCGGGAATGCCATTTTGTATGAGTGTGTTCAAACAATAATGAGCATTGAAGATAATGGTGGATTACGTGTGCTTGCAATCAATATCCTAGGAAGATTTTTGTCAAATCGGGATAACAATATCAGATATGTGGCATTGAACATGCTGATGAAGGCTGTGAGTGCTGATGCTCAGGCAGTGCAGAGACATCGTGCAACAATTCTGGAATGTGTAAAAGATTCTGATGCTTCAATTCGGAAAAGAGCCCTTGACCTTATTTATGTTCTGGTGAATGAAACCAATGTGAAGCCCTTAACGAAGGAGCTAGTAGATTATCTTGAAGTCAGTGATCAAGATTTCAGGGAGGAACTTACTACCAAAATTTGCTCAATAGTTTCAAAGTTTTCCCTTGAGAAGATCTGGTACATTGATCAGATGCTTAAGGTTCTGTCCAAGGCTGGAAATTTCCTAAAAGATGAAGTATGGCATGCCTTAATTGTTGTCATAAGCAACGCTTCCAAGCTTCATGGATACACTGTAAGAGCATTATACAAGGCATTTGAGACGTCAACAGAACAGGAAACTTTTGTCCGTGTTGCAATGTGGTGCCTCGGAGAGTATGGCGACTTATTAATCAATAATGTTGAAATGCTTGAAATAGAAGATCCAATAACAGTCACCGAATCAGATGCTGTGGATGTTGTCGAGCATGCTTTAAAACGCCATGCATCAGATCTTACCACAAAAGAAATGGCTTTGGTTGCCTTATTGAAGCTCTCTTCACGGTTTCCTTCATGTACAGAGAGAATCAGAGAAATAATCGTTCAGTACAAAGGGAACCTAGTGCTGGAATTGCAGCAAAGATCTATTGAGTTTAATTCCATTATTGCAAAGCATCAAAATATTAGTTCTACACTTGTAGAAAGGATGCCAGTTTTGGATGAGGCGACTTTCAATGCTAGGAGGGCGGGGTCTTTGCCAGATGTAGCTTCAACTCCAACAGGACCTTCAGTTAGTCTTCCGAATGGAGTAGTCAAATCTGTGGCTCCTCTTCTAGATTTGCTTGATCTAAGTGCAGATGATACTCCTGCGCCGAGCTCTTCTGGTGGTGATTTTCTTCAGGATCTTCTTGGTGATGATCAGTCAGTTGTGTCACGGCAGTCTGGTGCTACTCATACTTCAAAAAACGGCACAGATGTTCTTTTGGATCTTTTGTCGATTGGATCGCCTTCCGCACCTATTGAATCACCTCCTGCACAAAGCAACTCATCTATAATTGATATGTTATCCCCCAATACAAGTAAAAGGGAACCATTTTCATCATTGGATGATCTCTCATCAGTTTCACTTTCTTCACGAGCATCTTCAAATGCTGGAGCTGCTTCTATGACAGATTTATTGGATGGTTTTGCCTCTGGCCCATCAGCAAGTGAAAACAATGGACCAGTTTATCCATCTATAACTGCATTCGAGAGCAGCTCCTTGAGGTTGACATTCAATCTCTCAAAACAGCCAGGAAGCCCACAAACAACCAATATCCAAGCTACCTTTATGAATTTGTCCTCTAATGCATATACAGATTTTGTTTTCCAGGCAGCAGTTCCAAAGTTTCTTCAGTTGCTCTTGGATCCAGCTAGCGGCAATACTCTCCCTGCTAATGGAAAGGGGTCAATCACGCAAAATTTAAGAGTTACTAACAGCCAACATGGAAAGAAATCTCTTGTCATGCGTGTAAGGATAACATACAAGATAAATGGAAAGGATACACTGGAAGAAGGACAAATCACTAATTTTCCTCGTGATTTATGA	2649	0.4137	MNPFSSSTRLRDMIRAIRACKTAAEERAVVRKECAAIRASIDENDQYCRHRNMSKLMFIHMLGYPTHFGQMECLKLISSPGFPEKRIGYLGLMLLVDERQEVLMLVTNSLKQDLNHTNQYIVGLALCALGNICSAEMARDLAPEVERLLQFRDPNIRKKAALCSIRIIKKVPDLAENFVNPATNLLREKHHGVLITGVQLCTELCKISSEALEHIRKKCTEGLVRSLKDLANSSYSPEYDIAGITDPFLHIKLLRLLRALGEGDADASDSMNDILAQVATKTESNKVAGNAILYECVQTIMSIEDNGGLRVLAINILGRFLSNRDNNIRYVALNMLMKAVSADAQAVQRHRATILECVKDSDASIRKRALDLIYVLVNETNVKPLTKELVDYLEVSDQDFREELTTKICSIVSKFSLEKIWYIDQMLKVLSKAGNFLKDEVWHALIVVISNASKLHGYTVRALYKAFETSTEQETFVRVAMWCLGEYGDLLINNVEMLEIEDPITVTESDAVDVVEHALKRHASDLTTKEMALVALLKLSSRFPSCTERIREIIVQYKGNLVLELQQRSIEFNSIIAKHQNISSTLVERMPVLDEATFNARRAGSLPDVASTPTGPSVSLPNGVVKSVAPLLDLLDLSADDTPAPSSSGGDFLQDLLGDDQSVVSRQSGATHTSKNGTDVLLDLLSIGSPSAPIESPPAQSNSSIIDMLSPNTSKREPFSSLDDLSSVSLSSRASSNAGAASMTDLLDGFASGPSASENNGPVYPSITAFESSSLRLTFNLSKQPGSPQTTNIQATFMNLSSNAYTDFVFQAAVPKFLQLLLDPASGNTLPANGKGSITQNLRVTNSQHGKKSLVMRVRITYKINGKDTLEEGQITNFPRDL*	883

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal5g2891	882	SMART	alpha_adaptinc2	759	879	IPR008152	GO:0006886\|GO:0016192
	Mal5g2891	882	Pfam	Adaptin C-terminal domain	765	879	IPR008152	GO:0006886\|GO:0016192
	Mal5g2891	882	Gene3D	-	1	594	IPR011989	-
	Mal5g2891	882	PANTHER	AP-1 COMPLEX SUBUNIT GAMMA	5	882	-	-
	Mal5g2891	882	MobiDBLite	consensus disorder prediction	691	722	-	-
	Mal5g2891	882	MobiDBLite	consensus disorder prediction	693	722	-	-
	Mal5g2891	882	PIRSF	AP1_gamma	6	882	IPR017107	GO:0005794\|GO:0016192\|GO:0030121
	Mal5g2891	882	ProSiteProfiles	Gamma-adaptin ear (GAE) domain profile.	762	879	IPR008153	-
	Mal5g2891	882	Pfam	Adaptin N terminal region	27	578	IPR002553	GO:0006886\|GO:0016192\|GO:0030117
	Mal5g2891	882	Gene3D	-	752	881	-	-
	Mal5g2891	882	SUPERFAMILY	ARM repeat	25	592	IPR016024	-
	Mal5g2891	882	SUPERFAMILY	Clathrin adaptor appendage domain	740	881	IPR013041	-
	Mal5g2891	882	PANTHER	ADAPTIN, ALPHA/GAMMA/EPSILON	5	882	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal5g2891	Mal-Chr5	86135176	86148170	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal5g2891	K12391		-	gmx:100817075	1398.26

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal6g1670	6	31315420	31331173	Mal5g2891	5	86135176	86148170	PCT