Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2871 ATGACTCATTTTCATCAAAACCTACCCTTCTCATTTCTACTAATCTTTTGCTTAACAACATTGGTTTCTTCACATAGTAGGCCTTATTCACCTCCAAGTGTCACACACTTAACCAATTCTTTTCCTCATGTTCCTATTGAAAGTGCTTTTTCTAATGCTTTTGGAGCCTCAAATGTCAAATATCTTAGTAATGGGTCCATGGCTACCCTGGCTCTTGACAAAATCTCAGGCTCTGGCTTGGTATCACAAAATAGATACTCTTATGGATTCTTTAGTGCTGCAATCAAATTACCAGCTGGTTTGTCACCTGGAGTTGTAGTTGCTTTTTATTTGTCAAATGCAGATAAATTTCCTCACAACCATGATGAGATAGATATTGAACTACTTGGTCATGATAAGAGAAATGATTGGGTTATTCAAACAAATATCTATGCCAATGGAAGTGTCAGAACAGGAAGAGAAGAGAAATTCTATCTCTGGTTTGATCCAACACAGCAGCACCATTATTATAGCATCTTGTGGAACAGTTATCACACAGTGTTCTTTGTTGACAACATTCCAGTAAGAGAATTCATACACAAAACCACATACCCATTTATTTATCCATCAAAACCAATGTCATTATATGCAACAATATGGGATGGTTCAGAATGGGCAACACATGGAGGAAAATACCCTGTTAACTATAAATATGGACCATTTGTTGTTTCATTAGCTGAAATGGAATTGAGTGGTTGCATCACTGATCCAAAATCACCAATTTCTTCATGTTCTAAGTCCAATCCTTCAGGACTAGACCCTGTTAGTGGAGCAGAGTTTACTAAGCTATCACAACAACAGATAGCAGCTATGGATTGGGCAAGAAGGAAACTCATGTTTTATTCTTATTGTAATGATAGACCTAGATACAAAGTCTTACCACCAGAATGTCACTAA 936 0.3686 MTHFHQNLPFSFLLIFCLTTLVSSHSRPYSPPSVTHLTNSFPHVPIESAFSNAFGASNVKYLSNGSMATLALDKISGSGLVSQNRYSYGFFSAAIKLPAGLSPGVVVAFYLSNADKFPHNHDEIDIELLGHDKRNDWVIQTNIYANGSVRTGREEKFYLWFDPTQQHHYYSILWNSYHTVFFVDNIPVREFIHKTTYPFIYPSKPMSLYATIWDGSEWATHGGKYPVNYKYGPFVVSLAEMELSGCITDPKSPISSCSKSNPSGLDPVSGAEFTKLSQQQIAAMDWARRKLMFYSYCNDRPRYKVLPPECH* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2871 311 SUPERFAMILY Concanavalin A-like lectins/glucanases 50 310 IPR013320 -
Mal5g2871 311 Gene3D - 28 310 - -
Mal5g2871 311 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 33-RELATED 1 311 - -
Mal5g2871 311 Pfam Glycosyl hydrolases family 16 49 230 IPR000757 GO:0004553|GO:0005975
Mal5g2871 311 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 39 238 IPR000757 GO:0004553|GO:0005975
Mal5g2871 311 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 1 311 IPR044791 GO:0004553
Mal5g2871 311 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 274 310 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Mal5g2871 311 PIRSF EndGlu_transf 9 311 IPR016455 GO:0010411|GO:0016762|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2871 Mal-Chr5 85250112 85251889 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2871 14 311 Glycoside Hydrolase AT1G10550 64.474 1.23e-147 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2871 K08235 - gmx:100778993 543.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g2871 5 85250112 85251889 Mal5g2871 5 85250112 85251889 ECH