Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2862 ATGAGGAATCGGATGAGCATGGCAATGAGCGTAGTAGCAAACTCCTCCACAACATTTCTTCATATCCTACCCACCATTCACAAAACCATTATCCCCTTTTCTCTCACCAAAACGACGCCGTTTCTCATCTCCTTCACCACTCCCTCTCGCCGCTTTCTCTCTGTTTCCTCTCTTCCTTCTCTCTCCACTGACCATACCTTCAGCTTCTCTGATTCTGGAGGAGATGGAAATGGTGTTGCAGTTTCCAGGAGAGGTTCTAAAGTGCTCCTTAAAGGGATGACTTACCCTGAACTTGAAAAATGGGTTCAATCACATGGATACAGGCCAGGGCAGGCCATGATGTTATGGAAGCGTATGTATGGAAACAACATTTGGGCGCATCATACTGACGAGTTGGAAGGTTTGAACAAAGATTTCAAGAAGATGTTGAGTGAAAATGCAGATTTCAAGGCACTTTCTGTGAAAGAAATTCACGCAGCATCTGATGGAACTAGGAAGATTTTATTCACATTGGATGATGGGCTAGTCATAGAAACAGTTGTCATACCTTGTGATACAGGCAGGACTACTGTGTGTGTTTCCAGTCAAGTTGGATGTGCCATGAATTGTCAATTTTGCTATACTGGAAGAATGGGTCTCAAGAGACATCTTACTGCCGCAGAAATAGTCGAGCAGGCCGTTTTTGCCAGACGGCTATTCACAAGTGAAATTGGTTCCATCACCAATGTTGTATTTATGGGCATGGGGGAACCTCTTCATAACATTGATAATGTCATTAAAGCTGCAGATATTATGGTGGATGACCAAGGGCTTCATTTCAGCCCCCGCAAGGTCACTGTTTCAACCAGTGGGCTTGTTCCGCAGCTCAGACGTTTCCTTCACGAATCCAACTGTACATTAGCTGTTAGTTTGAATGCAACTACTGATGAGGTTAGAAACTGGATCATGCCTATAAATCGAAAGTATAAACTGGACTTGCTTCTTGAGACGCTTCGTGAGGAGCTTTGCTTCAAACACAAATATAAGGTTCTATTTGAGTATGTGATGCTTGAAGGAATCAATGACAGCAATGAAGATGCAAAGAGGCTTATCGAGCTTGTAAAGGGCATCCCTTGCAAGATCAATCTAATCTCATTCAATCCGCATAATGGTTCCTTCTTCAGACCAACCAAAGAGGAAAGGATAATTGAATTCCGAAATATGCTAGCTGAGGCAGGATGCGTAGTCCTTTTAAGACCGAGTAGGGGCGATGATCAGATGGCTGCATGTGGTCAGTTAGGCAAGCCCGGCACCATTCAAGCTCCGATGCTCCGTGTACCTCAGCAATTCCAAATGGCAGTTGGAAGTTCAACATGA 1356 0.441 MRNRMSMAMSVVANSSTTFLHILPTIHKTIIPFSLTKTTPFLISFTTPSRRFLSVSSLPSLSTDHTFSFSDSGGDGNGVAVSRRGSKVLLKGMTYPELEKWVQSHGYRPGQAMMLWKRMYGNNIWAHHTDELEGLNKDFKKMLSENADFKALSVKEIHAASDGTRKILFTLDDGLVIETVVIPCDTGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLFTSEIGSITNVVFMGMGEPLHNIDNVIKAADIMVDDQGLHFSPRKVTVSTSGLVPQLRRFLHESNCTLAVSLNATTDEVRNWIMPINRKYKLDLLLETLREELCFKHKYKVLFEYVMLEGINDSNEDAKRLIELVKGIPCKINLISFNPHNGSFFRPTKEERIIEFRNMLAEAGCVVLLRPSRGDDQMAACGQLGKPGTIQAPMLRVPQQFQMAVGSST* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2862 451 Hamap Dual-specificity RNA methyltransferase RlmN [rlmN]. 87 432 IPR027492 GO:0030488|GO:0070475
Mal5g2862 451 PANTHER 23S RRNA METHYLTRANSFERASE 55 434 IPR040072 -
Mal5g2862 451 Pfam Radical SAM superfamily 194 360 IPR007197 GO:0003824|GO:0051536
Mal5g2862 451 ProSiteProfiles Radical SAM core domain profile. 185 418 IPR007197 GO:0003824|GO:0051536
Mal5g2862 451 SFLD Radical SAM 86 428 IPR007197 GO:0003824|GO:0051536
Mal5g2862 451 SUPERFAMILY Radical SAM enzymes 187 405 - -
Mal5g2862 451 TIGRFAM rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 87 427 IPR027492 GO:0030488|GO:0070475
Mal5g2862 451 Pfam 4Fe-4S single cluster domain 198 291 - -
Mal5g2862 451 PANTHER RADICAL SAM SUPERFAMILY PROTEIN 55 434 - -
Mal5g2862 451 Gene3D - 87 149 - -
Mal5g2862 451 CDD Radical_SAM 198 398 - -
Mal5g2862 451 Gene3D Aldolase class I 151 432 IPR013785 -
Mal5g2862 451 SFLD adenosine C2 methyltransferase (RlmN-like) 86 428 IPR004383 GO:0006364|GO:0008173
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2862 Mal-Chr5 84943473 84949594 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2862 K06941 - gmx:100813692 701.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g2862 5 84943473 84949594 Mal5g2862 5 84943473 84949594 ECH