Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2857 ATGCACAAACACACCCTCCTTCTCTCTTATATCCTTCTCTCCACACTCACAGTTGGTTTAGCAGTGGATCATGCAGGAGACAAAAACCAAAACCCATTCACTGCAAAGGCGTTCGCAATTCGTTATTGGGACAGAGTGATCAAAAACAAGTTACCAAAGCCAACCTTCATCCTCTCCAAGGCATCACCTCTCAGCGCTACCGAAACCGTGGCTTTCGCGAAACACGCAGCCGCCAACACACTCTCCACAAAGCTGCCGGAGTTCTGCTCGGCCGCCCATCTCCTCTGCTTCCCAGAAGTAACTCCCAGCCTCAGAAAACACTCTGAGGATGGAAAATTCTCCGTCTACAACGACGGTCAGAATTTCACCAACTATGGAACAGCAAGACCCGGTGGAATAGACTCCTTCAAAAACTACTCCAACGGTTTTGAAAGCAATCCGGTAAACGAGTTCCGTCAATACAGCCGCAGCTCTGCCGGCCACAACGACAGTTTCACCAACTATGCTACTGAAACCAATGTTGCAGATCAGAATTTTAACACCTACGGCTCCGCAGCCGCTGGTGGCTCCGGCGAGTTCAAAGCATATGCTAAAGACACCAACGTTCCTAACCTAAGGTTCACTACGTACTCCGTTTCCACTGCAGGTAGACAACAGACGTTCTCTAGCTACAGTGAAAACGGAAACGCCGGTGATCAGAGTTTCGGCAACTACGGAAAAGACTCCGCAGGGGCCGAAAACAAGTTCACGGCGTATGGAACGGACTCTAACGTGGCTTCTTCAGGTTTTTCAAGTTACACCGACCAAGGTACAGGTAATAAAGACACGTTCGTTAATTATGGTGTTAATATGAATAATCCAACAGAAAATTTCAAAAATTATGCACGAGGAAGTTTAGGTGCTGTTGAAAAATTCTCAAACTATAGAGATCAAGCCAATGTTGGTGCTGACTCGTTTAGTTCTTATGCTAAGGACTCAACGGGTGGGACCCACGTTGATTTTGATAACTATGGTAAATCTTTTAATGAAGGAACCGACAGTTTCAAAGGTTATGCTAAAGGTGCTGATGTGGATCATAAGGTTACTTTCAAAGGTTACGGTGTTAATAACACGTTTAAGGATTATGATAAAAAAGGCATTTCTTTTGCTGGTTATACTAAGAAGGGTTCTTCTTCAATTAACTCTGTTAGTGATAGTGTTAGTTTGGTAAAAAAGTGGGTTCAACCGGGTAAGTTTTTCCGGGAAAAAATGTTGAAGCAAGGGGTGGTTATGCCTATGCCGGATATTAAGGATAAATTACCACAAAGGTCGTTTTTGCCACGTACCATTTTGACTAAATTGCCCTTTGCATCTTCTAAGTTGAATGAGTTGAAGCAAGTTTTTAAGGTGTCTGAGAATTCATCAATGGACAAGATGATAGTTGACTCTTTGAGTGAGTGTGAGAGGGTCCCGAGTAAGGGCGAGACAAAACGTTGTGTGGGTTCGCTCGAGGATATGATTGACTTTGCAACTTCTGTTTTGGGCCATGATGTGACGGTTCGGTCCACTGAGAGTGTAAATGGATCAGGCAAGAATGTTATGGTTGGAAAGGTTAGAGGGATAAATGGAGGGAAAGTAACTCAATCTGTGTCTTGTCATCAAAGTTTGTTCCCTTATTTGCTATACTATTGTCATTCGGTTCCAAAGGTTCGGGTTTATGAAGCCGATCTTTTGGACCCTGAGTCTAAGGTGAAGATTAATCATGGTGTTGCTATTTGTCACTTGGATACAACTTCTTGGAGCCCCACACACGGTGCATTCATGGCTCTCGGGTCAGGACCAGGTCGAATTGAAGTGTGCCACTGGATCTTTGAGAATGATATGACTTGGACTACTGCGGACTAA 1884 0.4427 MHKHTLLLSYILLSTLTVGLAVDHAGDKNQNPFTAKAFAIRYWDRVIKNKLPKPTFILSKASPLSATETVAFAKHAAANTLSTKLPEFCSAAHLLCFPEVTPSLRKHSEDGKFSVYNDGQNFTNYGTARPGGIDSFKNYSNGFESNPVNEFRQYSRSSAGHNDSFTNYATETNVADQNFNTYGSAAAGGSGEFKAYAKDTNVPNLRFTTYSVSTAGRQQTFSSYSENGNAGDQSFGNYGKDSAGAENKFTAYGTDSNVASSGFSSYTDQGTGNKDTFVNYGVNMNNPTENFKNYARGSLGAVEKFSNYRDQANVGADSFSSYAKDSTGGTHVDFDNYGKSFNEGTDSFKGYAKGADVDHKVTFKGYGVNNTFKDYDKKGISFAGYTKKGSSSINSVSDSVSLVKKWVQPGKFFREKMLKQGVVMPMPDIKDKLPQRSFLPRTILTKLPFASSKLNELKQVFKVSENSSMDKMIVDSLSECERVPSKGETKRCVGSLEDMIDFATSVLGHDVTVRSTESVNGSGKNVMVGKVRGINGGKVTQSVSCHQSLFPYLLYYCHSVPKVRVYEADLLDPESKVKINHGVAICHLDTTSWSPTHGAFMALGSGPGRIEVCHWIFENDMTWTTAD* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2857 627 SMART BURP_2 410 626 IPR004873 -
Mal5g2857 627 Pfam BURP domain 412 624 IPR004873 -
Mal5g2857 627 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 7 627 - -
Mal5g2857 627 ProSiteProfiles BURP domain profile. 412 626 IPR004873 -
Mal5g2857 627 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 7 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2857 Mal-Chr5 84867228 84869307 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2857 - - gmx:100811362 909.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g2857 5 84867228 84869307 Mal5g2857 5 84867228 84869307 ECH