Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2856 ATGGCAGAGGCAAAACCTGGATTGAGAAAGCCGGTGTTCACTAAGGTTGAACAGCTTCGACCGGGGACTAGTGGCCACACTCTGACTGTCAAGGTGGTGAATACTAAGATGGTGATGCAAAAGGGTCGTCCTGATGGTCCTCAACCTCGCCAGATGCGAATTGCTGAAAGTTTGGTGGGTGATGAGACTGGGATGATCATATTTACTGCAAGAAATGATCAAGTGGATCTGATGAAAGATGGCTCTACTATCATTTTGCGAAATGCGAAAATTGACATGTTTAAAGGATCAATGAGGCTTGCTGTGGACAAATGGGGCCGTGTTGAGGTCGCAGATCCTGCTGATTTCACCGTTAAGGAAGACAATAACCTGTCCCTTATTGAATATGAACTTGTTAATGTTGTGGAGTAA 411 0.4501 MAEAKPGLRKPVFTKVEQLRPGTSGHTLTVKVVNTKMVMQKGRPDGPQPRQMRIAESLVGDETGMIIFTARNDQVDLMKDGSTIILRNAKIDMFKGSMRLAVDKWGRVEVADPADFTVKEDNNLSLIEYELVNVVE* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2856 136 PANTHER F5O8.30 PROTEIN 1 135 - -
Mal5g2856 136 PANTHER OS05G0244600 PROTEIN 1 135 - -
Mal5g2856 136 CDD SoSSB_OBF 27 110 - -
Mal5g2856 136 Gene3D - 23 126 IPR012340 -
Mal5g2856 136 SUPERFAMILY Nucleic acid-binding proteins 4 134 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2856 Mal-Chr5 84826536 84833221 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2856 - - csv:101212074 251.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g2856 5 84826536 84833221 Mal5g2856 5 84826536 84833221 ECH