Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2834 ATGGCAGATTCTGTTGATATTATCACTCACGACGTTCACTCTATTCTCTCTTCTTCCGATACACACTTTCTTCTTCGGAACAACGCCGATCAGGTAAAAATTGACAGCTTGAAAGGAAAGAAGCTTGGTTTCTATTTTTCAGCATCATGGTGTGGTCCGTGTCGAGCATTCACTCCAACATTGGTGGAGGTGTACAATGAACTCTCTCCAAATGGTGACTTTGAGGTTGTTTTTGTCTCAGCTGATCAAGATGATGAGGCCTTTAAGAGCTACTTTTCCAAGATGCCGTGGCTGGCTATCCCGTTTTCTGATTCAGAGACACGCAGTCGCCTTGATGAATTGTTTCATGTAAATGGCATTCCTCATCTTGTTTTGCTTGATGAAGCTGGAAAAGTTGTTGCTGAAGATGGAGTTGACATTATCCGTGATTATGGAGCTGAAGGATACCCTTTCACATCAGAAAGGGTTCAAGAGTTGAAGGATCAAGAAGAGGAATCTAAGAGGAATCAATCCTTGAGATCTATATTGGTGTCTCGTTCCCGTGACTTTCTGATATCATCCGATGGAAATAAAATACCTATCTCTGAGCTTGAGGGAAAGACAGTTGGTCTGTATTTGTGTGCGACTTCATACAGAGCATGCACGCTGTTTACTCCAAAACTTAACGAGGTTTACAAGAAGCTGAAGGAAAAGGGGGAGAACTTTGAGGTTGTATTTATACCACTAGATGATGACGAAGAGTCATTCGAGAAAGAATTAGAAAGTGCGCCTTGGTTATCCTTGCCTATCAAGGACAAAACTTGTGTGAAACTAATTAAGTACTTTGAGCTATCAGAACTCCCCACCTTGGTTATTATTGGGCCAGATGGGAAAACTCTTCATCCTAATGTTGCTGAGGCCATTGAGGATCATGGGATCGATGCATATCCATTCACCCCCGAGAAGTTTTCTGAACTCGAGGAAATAGCAAAGGCCAAGGAGGCATCTCAAACACTTGAGTCAGTTTTGGTGTCTGGCGATCAAGATTTTGTCATTGACAAAAATGGGAAGAAGATTCCGGTGTCAGAATTGAAGGGGAAGACTGTCCTCCTCTACTTCTCAGCCCACTGGTGTCCTCCGTGCCGTGCGTTTCTTCCAAAACTCATTGATGCATACCATAAGATTAAGGCACAAGACAATGATGCACTTGAAGTGGTTTTCCTCTCGAGTGACAGGGATCAAGAATCCTTTGATGAATTCTTTGCGGGAATGCCATGGCTGGCACTTCCCTTTGGTGACTCAAGAAAAGAATTTCTAAGTCGCAAATTCAAGGTATCTGGCATTCCCATGCTCGTGGCGATCGGACCAAGTGGCCAGACTGTCACGAGAGAGGCTCGAGATCTGGTTGGGCTTTATGGGGCAGATGCTTATCCTTTCACTGAGGAGAGAATAAAAGAACTAGAGGCAAAAAATGATGACGTTGCAAAGGGGTGGCCTGAGAAGGTGACGCATGAAACACACGAGCATGAACTTGTATTGTCGCGCCGCAGGGTTTATTACTGCGATGGTTGCGAAGAGGAGGGACATAATTGGTCATACTTCTGTGAAGAGTGTGACTTTGATCTTCATCCAAATTGTGCACTGGGAGACAAAGGAAGCATAAATGGTGCCAAGGAAGAAGAGAAGCCCAAAGATGGATGGGTTTGTGATGGAGATGTCTGCACCAAAGCCTGA 1713 0.4425 MADSVDIITHDVHSILSSSDTHFLLRNNADQVKIDSLKGKKLGFYFSASWCGPCRAFTPTLVEVYNELSPNGDFEVVFVSADQDDEAFKSYFSKMPWLAIPFSDSETRSRLDELFHVNGIPHLVLLDEAGKVVAEDGVDIIRDYGAEGYPFTSERVQELKDQEEESKRNQSLRSILVSRSRDFLISSDGNKIPISELEGKTVGLYLCATSYRACTLFTPKLNEVYKKLKEKGENFEVVFIPLDDDEESFEKELESAPWLSLPIKDKTCVKLIKYFELSELPTLVIIGPDGKTLHPNVAEAIEDHGIDAYPFTPEKFSELEEIAKAKEASQTLESVLVSGDQDFVIDKNGKKIPVSELKGKTVLLYFSAHWCPPCRAFLPKLIDAYHKIKAQDNDALEVVFLSSDRDQESFDEFFAGMPWLALPFGDSRKEFLSRKFKVSGIPMLVAIGPSGQTVTREARDLVGLYGADAYPFTEERIKELEAKNDDVAKGWPEKVTHETHEHELVLSRRRVYYCDGCEEEGHNWSYFCEECDFDLHPNCALGDKGSINGAKEEEKPKDGWVCDGDVCTKA* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2834 570 ProSiteProfiles Thioredoxin domain profile. 14 161 IPR013766 -
Mal5g2834 570 Pfam Thioredoxin-like 359 452 IPR012336 -
Mal5g2834 570 Pfam Thioredoxin-like 199 291 IPR012336 -
Mal5g2834 570 Pfam Thioredoxin-like 40 132 IPR012336 -
Mal5g2834 570 CDD TryX_like_TryX_NRX 342 472 IPR045870 GO:0004791
Mal5g2834 570 SUPERFAMILY Thioredoxin-like 344 456 IPR036249 -
Mal5g2834 570 ProSitePatterns Thioredoxin family active site. 363 381 IPR017937 -
Mal5g2834 570 Pfam C1 domain 499 540 IPR004146 -
Mal5g2834 570 Gene3D Glutaredoxin 175 312 - -
Mal5g2834 570 Gene3D Glutaredoxin 337 473 - -
Mal5g2834 570 Gene3D Glutaredoxin 15 153 - -
Mal5g2834 570 PANTHER NUCLEOREDOXIN 1-2-RELATED 5 541 - -
Mal5g2834 570 SUPERFAMILY Cysteine-rich domain 491 543 IPR046349 -
Mal5g2834 570 SUPERFAMILY Thioredoxin-like 184 294 IPR036249 -
Mal5g2834 570 CDD TryX_like_TryX_NRX 23 151 IPR045870 GO:0004791
Mal5g2834 570 ProSiteProfiles Thioredoxin domain profile. 319 482 IPR013766 -
Mal5g2834 570 PANTHER THIOREDOXIN 5 541 - -
Mal5g2834 570 SUPERFAMILY Thioredoxin-like 24 134 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2834 Mal-Chr5 84192554 84195151 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2834 K17609 - gmx:100809224 913.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g2834 5 84192554 84195151 Mal5g2834 5 84192554 84195151 ECH