Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2829 ATGGCAGACATTGAAACCGTGATCAGAAGAGTCACCTCTGTAACCAACCACCTTGTTTCCTCAACAACACCTCAACTCATTTCCTTGTCCCACACTTCCAGTTACCAACGTGTTCATGGTGATGTTCCCTCTCATGATGTCGTTTGGAAGATTGTTCCTTCTGATGATGATGACCCAGGAAAGGTTTTCACTGACATTGTCTACGAGAAATCTGTTGGTGAAGGAATAGCCAAGATTAGTATTAATAGGCCAGAGAGAAGAAATGCTTTTCGACCTCACACGGTCAAGGAGCTTATTCGTGCTTTCAATGATGCTAGAGATGATCCCTCTGTTGGTGTCATCATTCTCACTGGAAAGGGAACAGATGCATTTTGTAGTGGTGGTGACCAAGCCTTGAGGACTCCAGATGGTTATTCTGATCATGAAAATATCGGTCGCCTTAATGTGTTAGACTTGCAGGTGCAAATCCGCCGCCTTCCAAAACCAGTAATTGCAATGGTTGCAGGGTATGCTGTTGGAGGAGGGCATATATTGCATATGGTTTGTGATCTAACCATTGCAGCAGATAATGCTATCTTTGGACAAACTGGTCCTAAGGTTGGGAGCTTTGATGCTGGTTATGGAAGTTCTATCATGTCACGTTTGGTAGGTCCTAAAAAAGCACGCGAAATGTGGTTTCTCACAAGGTTCTATACTGCTGTTGAGGCGGAGAAAATGGGCCTTATCAACACTGTTGTACCGCTAGAGAATTTAGAGAAAGAAACAATCAAATGGTGCAGGGAGATACTCAGAAATAGCCCAACTGCAATTCGGGTTCTCAAGGCAGCTATTAATGCAGTGGATGATGGGCACGCCGGACTTCAGGAAATGGGTGGAAATTCAACATTGATATTTTATGGCACTGAAGAAGCAAATGAAGGAAAAACTGCATATATGGAGCGTCGACGCCCAGATTTTTCTAAGTTTAATAGAAGACCATAA 981 0.4343 MADIETVIRRVTSVTNHLVSSTTPQLISLSHTSSYQRVHGDVPSHDVVWKIVPSDDDDPGKVFTDIVYEKSVGEGIAKISINRPERRNAFRPHTVKELIRAFNDARDDPSVGVIILTGKGTDAFCSGGDQALRTPDGYSDHENIGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHILHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLTRFYTAVEAEKMGLINTVVPLENLEKETIKWCREILRNSPTAIRVLKAAINAVDDGHAGLQEMGGNSTLIFYGTEEANEGKTAYMERRRPDFSKFNRRP* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2829 326 CDD crotonase-like 66 262 - -
Mal5g2829 326 Gene3D - 266 314 IPR014748 -
Mal5g2829 326 TIGRFAM menB: naphthoate synthase 63 322 IPR010198 GO:0008935|GO:0009234
Mal5g2829 326 PANTHER NUCLEOSIDE-DIPHOSPHATE-SUGAR EPIMERASE 5 326 IPR010198 GO:0008935|GO:0009234
Mal5g2829 326 Hamap 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 49 325 IPR010198 GO:0008935|GO:0009234
Mal5g2829 326 Pfam Enoyl-CoA hydratase/isomerase 74 320 IPR001753 GO:0003824
Mal5g2829 326 ProSitePatterns Enoyl-CoA hydratase/isomerase signature. 164 184 IPR018376 GO:0003824
Mal5g2829 326 SUPERFAMILY ClpP/crotonase 65 321 IPR029045 -
Mal5g2829 326 Gene3D - 48 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2829 Mal-Chr5 84015700 84036516 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2829 1 326 Acyl Lipid Metabolism Gene Families AT1G60550 76.558 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2829 K01661 - gmx:100807101 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g2829 5 84015700 84036516 Mal5g2829 5 84015700 84036516 ECH