Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2742 ATGTGCATTCATTCTCAAAAGATTCACACACCACCACCAGCTATGCCTTCACCTTCTTCTCCCGAAGTCGTTAACTCCGACCCTGAACCTAACTCCCAATCCAAACCTAATTCCCCATCCGAACCTGCTTCAACTTCTCTGATAACCATCACACCTGAACAATCCAACCCTCCCGAACCTAATCCCAATCCCAATCCCAATCCCGAACCTAACAACTCTCACAATGCTCCTCCTCAACAAACCACCGCAAACAAACCACCGCCATCCTCCGACAAAATCGTGACGGCAATCGGCGAAGATTTATTCGACGATCTTCCGCCGTTAACTTTCGTACCGAAACCACTGAGCATGATAGACAAACCACTACCAACCTCCGCGGAAGTTGCCGGCGGCGAAGATTTACCGCCGTTAACCAATGAACCGAAACGACTGGTAACTCTTGGTGATTTTGATGGCGACTCTTGGTGGAAGAAGCAGTTAGCAACTGGTATCTCTGTTCTTGCTGATCATGCTAATCCTTCAGATGATGAATTTGGTGTTGGTGGTTACCTAGGATCATTCTCGATTAGCACAAATCTTGCTTCGTACAATAGCCGTAAACCTTACGAATTCGATTGCGGTAGCTGGTCGCCGGTTCGTCGTTATGGTTATAATCCCGACGATCTCTTCGCCTCCGCGTCGTCGCCTTCGTCGAAATTGGTGGGAGCTGGAATTACGAATATGGGAAATACGTGTTTTATGAGTGCAATTCTTCAGTGTTTTACACATTCAGTGCAAATGTTTCTTGGTCTTCGCTATAGCACTCATGATTCTCCATGTGATGAGAAGGGTTTCTGTGTTATATGTGCTTTCCGCAATCACCTTGACCATGCTTTAGAACCTTCTAGACTTCCAATTATTCCTAGAGTGCTTGTTAACAATTTGAATTATTTTTCATCTGGTTTTGTAAGAGGTAACCAGGAGGATGCGCATGAGTTTATGCAATGTGCTTTGGATAAACTGAAAAGAGGCTTCCCAGTTGGAGAAGAAAATCTAATTGATCAAATATTTGGGGGTCTTCTTTTTAGCAAACTTCGCTGTTGCAGCTGTGGTCACTCTTCTGATACATTTGAGCCGATGATTGACATAAGTTTAGAGATAGAAAATATGAGTACCATTCAGCAGGCTCTGGAATCTTTCACCATGGTAGAAAAGATGGATGCAAAGTTTACATGTAGTGGCTGCAACCAAGAAGTAACCATGGAGAAACAGCTTATGCTTGATAAAGCACCTTCAGTTGCAGCATTTCATCTGAAAAGGTTTAAAAAAGATGGAGACTCTGTCAAAAAAATTGACAGTCATGTTGGTTTCTCTAAGGAATTGGACTTGCAGCCGTATACCTCTGGCAATGGCAGTGACAATGTACTTTTGAAGTATGATCTATATGCAGTTGTTGAGCATAGGGGATTTACACCTAATTCAGGGCATTACTTTTGCTTTGTGCGTTCTGCTCCAGACAAATGGCATTTGATGGATGACGATAAGGTTTCTAGTGTTTCTGAAGAAGAAGTGCTGACTCATAAGGCATACATTCTGTTTTATGCACAACAAGGTACTCCCTGGTTCTCTAGTATTGTGGAAAATGAAGAGACAGTTCCAAAATCAAATTTTTTTGACAATAAAGATGATTATGATAATAATGGAGAAAAGGGTGATAACGACTCAACGGATGCAAATTATGATAATTGTGTGAGTGACTTGGATGAAGAGTGTGATTCCGTAATGAAAGACATTTCACCTTGA 1782 0.4226 MCIHSQKIHTPPPAMPSPSSPEVVNSDPEPNSQSKPNSPSEPASTSLITITPEQSNPPEPNPNPNPNPEPNNSHNAPPQQTTANKPPPSSDKIVTAIGEDLFDDLPPLTFVPKPLSMIDKPLPTSAEVAGGEDLPPLTNEPKRLVTLGDFDGDSWWKKQLATGISVLADHANPSDDEFGVGGYLGSFSISTNLASYNSRKPYEFDCGSWSPVRRYGYNPDDLFASASSPSSKLVGAGITNMGNTCFMSAILQCFTHSVQMFLGLRYSTHDSPCDEKGFCVICAFRNHLDHALEPSRLPIIPRVLVNNLNYFSSGFVRGNQEDAHEFMQCALDKLKRGFPVGEENLIDQIFGGLLFSKLRCCSCGHSSDTFEPMIDISLEIENMSTIQQALESFTMVEKMDAKFTCSGCNQEVTMEKQLMLDKAPSVAAFHLKRFKKDGDSVKKIDSHVGFSKELDLQPYTSGNGSDNVLLKYDLYAVVEHRGFTPNSGHYFCFVRSAPDKWHLMDDDKVSSVSEEEVLTHKAYILFYAQQGTPWFSSIVENEETVPKSNFFDNKDDYDNNGEKGDNDSTDANYDNCVSDLDEECDSVMKDISP* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2742 593 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 237 252 IPR018200 GO:0004843|GO:0006511
Mal5g2742 593 MobiDBLite consensus disorder prediction 74 89 - -
Mal5g2742 593 MobiDBLite consensus disorder prediction 55 73 - -
Mal5g2742 593 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 472 490 IPR018200 GO:0004843|GO:0006511
Mal5g2742 593 Gene3D Cysteine proteinases 232 531 - -
Mal5g2742 593 MobiDBLite consensus disorder prediction 20 54 - -
Mal5g2742 593 PANTHER UBIQUITINYL HYDROLASE 1 228 553 - -
Mal5g2742 593 Pfam Ubiquitin carboxyl-terminal hydrolase 237 527 IPR001394 GO:0004843|GO:0016579
Mal5g2742 593 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 236 530 IPR028889 -
Mal5g2742 593 MobiDBLite consensus disorder prediction 549 575 - -
Mal5g2742 593 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 228 553 - -
Mal5g2742 593 SUPERFAMILY Cysteine proteinases 236 529 IPR038765 -
Mal5g2742 593 MobiDBLite consensus disorder prediction 549 569 - -
Mal5g2742 593 MobiDBLite consensus disorder prediction 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2742 Mal-Chr5 81556951 81560349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2742 237 529 Miscellaneous Gene Families AT2G24640 34.516 4.36e-53 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2742 K11855 - fve:101303715 394.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g2742 5 81556951 81560349 Mal5g2742 5 81556951 81560349 ECH