Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2665 ATGGCTCTATCACGCTTCTCATCCTCTCAATTCGGATCCACCCTTCTCAAACCCTACTTCCTATCATCATCCATACGACACCGTTCCATCTCTTCTTCATCCACCGAAACCCTAACCGTCGAAACCTCCATCCCCTTCACTTCCCACAACTGCGAACCACCTTCCACCACCGTCTCCACCACCGCCTCCGAACTCATGTCCTTCTTCAACGACATGGTTCTCATGCGCCGTATGGAAATCGCAGCAGATTCACTCTACAAAGCCAAACTCATCCGCGGTTTCTGCCATCTCTACGACGGTCAGGAAGCTGTTGCTGTTGGAATGGAAGCCGCCATTAATCGAAAAGACTGCGTAATCACTGCTTATCGTGATCACTGCACCTTTCTGTGCCGTGGTGGAACCCTAGTTGAGGTTTTTTCTGAATTGATGGGGAGGAAAGATGGGTGTTCGAAGGGGAAAGGAGGTTCGATGCATTTTTATAGGAAGGAAGGTGGGTTTTATGGTGGACATGGGATTGTTGGAGCGCAGATTCCTCTTGGGGTTGGATTAGCTTTTGGTCAGAAGTATAGTAAGGATCCCAATGTTACTTTTGCTTTGTATGGTGATGGTGCTGCTAATCAGGGTCAGTTGTTTGAAGCGCTTAATATTGCTGCTCTTTGGGATCTTCCTGCTATTTTGGTTTGTGAGAATAATCATTATGGAATGGGGACTGCTGAGTGGAGATCTGCCAAGAGTCCTGCGTATTACAAGCGTGGGGATTATGCTCCTGGATTGAAGGTAGATGGTATGGATGTTCTTGCTGTAAAGCAAGCTTGCAAATTTGCAAAGGAACATGCTTTGAAGAATGGTCCCCTGATTCTTGAAATGGACACTTACAGATACCATGGCCACTCCATGTCCGATCCGGGCAGCACATACCGCACACGTGATGAGATTAGTGGTGTTAGACAGGAGCGTGATCCAATTGAGAGAGTAAGAAAGCTGGTATTGGCTCACGACATTTCTACTGAAAAGGAATTAAAGGATATTGAAAAGGAAGCAAGGAAACAAGTTGACGAAGCCATTGCCAAAGCAAAGGAAAGTCAAATGCCAGACCCTTCCGATCTATTTACCAATGTATATGTTAAAGGCTTAGGGGTTGAGGCATGTGGTGCTGATAGGAAAGAAGTAAAAGCTACTTTGCCATAA 1188 0.4613 MALSRFSSSQFGSTLLKPYFLSSSIRHRSISSSSTETLTVETSIPFTSHNCEPPSTTVSTTASELMSFFNDMVLMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAINRKDCVITAYRDHCTFLCRGGTLVEVFSELMGRKDGCSKGKGGSMHFYRKEGGFYGGHGIVGAQIPLGVGLAFGQKYSKDPNVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRSAKSPAYYKRGDYAPGLKVDGMDVLAVKQACKFAKEHALKNGPLILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERVRKLVLAHDISTEKELKDIEKEARKQVDEAIAKAKESQMPDPSDLFTNVYVKGLGVEACGADRKEVKATLP* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2665 395 CDD TPP_E1_PDC_ADC_BCADC 68 358 - -
Mal5g2665 395 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA, MITOCHONDRIAL 14 395 - -
Mal5g2665 395 MobiDBLite consensus disorder prediction 298 318 - -
Mal5g2665 395 TIGRFAM PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 63 375 IPR017597 GO:0004739|GO:0006086|GO:0043231
Mal5g2665 395 Coils Coil 337 357 - -
Mal5g2665 395 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 14 395 - -
Mal5g2665 395 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 58 376 IPR029061 -
Mal5g2665 395 Pfam Dehydrogenase E1 component 71 366 IPR001017 GO:0016624
Mal5g2665 395 Gene3D - 19 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2665 Mal-Chr5 77991351 78004128 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2665 1 395 Acyl Lipid Metabolism Gene Families AT1G24180 78.086 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2665 K00161 - gmx:100816737 677.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g2665 5 77991351 78004128 Mal5g2665 5 77991351 78004128 ECH