Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2579 ATGAGCATCTCAACCACTGTTTTCTCTGAACCACTCTTCAACTTCAAACTCTCTCACTACCACAGATTAGCTACCATTCACCGTTTCAAGCCAAATCCACACTCTCTCTCTTCCTCTTCCAATATTAACAACTATGCTTCTTGTTCTTTGACATTGAAGCCACCCCACAAGTTTCTCTCTCCAAAGTTTGAAACTTTTGCTACAAATACTGATACCCTTCAAGAGATTCAATCTTCTGATGTCATTTTCAATCAGACTCATCCCATCACCAGAATTGAACTGGTGGAGGGAAAAGTGTTTATAAGATTAGATCACGGGGAGGATTTGAAGAATTCAGAGCTTATAGTTGGTTGCAATCTACCAGGAAAATGGATTCTTCATTGGGGAGTTTCCCGTGGGGATGATGTTGGAAGGGAATGGGATCAACCTCCTCGTGATATGATACCTCCTGGATCTATTCCTATAAAGGACTATGCAATAGAGACACCTTTGAAGAAATCATCATCGGAAGGAGATACTTTTTATGAAGTCAGGATCGGTCTTAAACCTAGCCATGAGATTTCAGCGATTAATTTTGTACTCAAGGACGAGGAGACCGGTGCTTGGTATCAACACAAAGGAAGAAACTTCAAGGTTCCTCTGGTAAACTATCTTAAGGAGGATGCTAATTTAATTGGACCTAGTTTGTCACAAGGGGACATAGGGCAGATATCCAATGTTCTCGCGAATTCGGAAGCAACCGATGAAAAAGTTCAAGATAACAACAGTGAATCCGAAAATCTAAAAATGGAAAACAGTCAAGTAGAAGGTTTCAATGTAGAACTGCCTTTAACCAAGGAAGTTACTGTCAATAATTCTATCAGTGTCTCCGTTAAGAAATGCTCCGAAACAGCTAAAAATATTCTGGATTTAGAAACAGATATACCGGGAAATATTTTCCTTCATTGGGGAGTTTGTAGAGATGATTTAAGAAGTTGGGAAGCTCCACCTGCTCCTCATCCACCGCAAACTGTAGCATATAAAGACACAGTTTTGCGAACTCAATTAAAGTCAAGAGGCAGTGGAGAGGGAAGTTCAGTACAAATCTCTCTGGGAGAAGAATTTTCAGGATTTCTTTTTGTTCTTAAGATAAATGAAAATTCGTGGTTAAATAACAAGGGAATTGATTTTTACGTCCCTCTCTCAACTTCCGGTAGCTTAGTTATTGGCAACAGAGAGGATCAATCGAAAGTGAAGAGTGAAGAGGCAGGCGAAGAGGAATCTAACTCTGAATTTACCAATGAAATAATCAATGAAATAAGGCATTTGGTTACAGGCATTTCATCTGTGAAGAGACGAAAAAGAAAATCCAAAGAAGCTCAAGAAACCATTCTTCAAGAAATTGAAAGACTGGCTGCAGAAGCCTACAGTATCTTCAGAACCTCTGTTCCAACTTTCTCGGAGGAAACTATTGTGGAACCCGAGGTTGTTTTAGATTCCGAATCACCAGAGTTGCCACCAAAAATAATGTCGGGAACAGGCACAGGGTATGAAATAGTATGCCAAGGATTTAATTGGGAGTCTAATAAATCTGGAAGATGGTACATGGAGCTTAAAGAGAAAGCTAAAGAACTAGCGTCTCTTGGCTTCACTGTGATTTGGTTACCACCACCTACAGACTCTGTTTCACCTGAAGGATACATGCCAAGGGATTTGTATAATTTAAATTCTAGATATGGTACCATTGATGAACTGAAGGATGTGGTGAAAGCATTTCATAAAGTTGGAATCAAAGTGCTAGGAGATGCTGTTTTGAATCACCGTTGTGCCGAGTTTCAGAATAAGAATGGTATTTGGAACATATTTGGAGGTCGTCTCAACTGGGATGATCGTGCAGTTGTAGCTGATGATCCACATTTTCAGGGGAGGGGCAACAAGAGTAGTGGAGATAGTTTCCATGCAGCTCCAAACATTGATCATTCACAGGACTTTGTGAGAAAGGATATTAAAGAATGGTTATGCTGGTTAAGGGAAGAAATTGGATATGATGGGTGGAGGCTTGACTTTGTCAGAGGATTTTGGGGTGGTTATGTAAAGGACTACATGGATGCAACCAAACCATACTTTTCCGTGGGAGAGTACTGGGATTCCCTCAGTTATACATATGGTGAAATGGATCATAATCAAGATGCACACAGGCAGAGGATCATTGACTGGATCAGTGCTGCTGGTGGTACTGCTGGTGCATTTGATGTTACAACCAAAGGGATTCTTCACGCTGCATTGGAAAGATGTGAGTATTGGCGCTTGTCAGATCAGCAGGGAAAACCCCCCGGCGTTCTTGGATGGTGGCCGTCTCGTGCTGTTACCTTTATAGAAAACCATGACACTGGTTCTACACAGGGTCACTGGAGATTTCCCCACAAAAAAGAAATGCAAGGATATTGTTATACTCTTACTCACCCAGGAACTCCGTCAGTGTTCTTTGACCACATTTTTTCTGACTATAAAACTGAAATAGGAGCACTTCTCTCTATTCGGAAACGGAACGGGATCAACTGCAGGAGTACAGTACAAATTACCAAGTCAGAAAGGGACGTTTATGCTGCTATCATAGATAAAAAAGTTGCTATGAAGATCGGTCCTGGTCATTATGAACCACCAAGTGATTCCCAAAAATGGAAATCAGCTTGGGATGGAAGAGACTATAGTATTTGGGAGCTGGAGGAATCATAA 2715 0.4092 MSISTTVFSEPLFNFKLSHYHRLATIHRFKPNPHSLSSSSNINNYASCSLTLKPPHKFLSPKFETFATNTDTLQEIQSSDVIFNQTHPITRIELVEGKVFIRLDHGEDLKNSELIVGCNLPGKWILHWGVSRGDDVGREWDQPPRDMIPPGSIPIKDYAIETPLKKSSSEGDTFYEVRIGLKPSHEISAINFVLKDEETGAWYQHKGRNFKVPLVNYLKEDANLIGPSLSQGDIGQISNVLANSEATDEKVQDNNSESENLKMENSQVEGFNVELPLTKEVTVNNSISVSVKKCSETAKNILDLETDIPGNIFLHWGVCRDDLRSWEAPPAPHPPQTVAYKDTVLRTQLKSRGSGEGSSVQISLGEEFSGFLFVLKINENSWLNNKGIDFYVPLSTSGSLVIGNREDQSKVKSEEAGEEESNSEFTNEIINEIRHLVTGISSVKRRKRKSKEAQETILQEIERLAAEAYSIFRTSVPTFSEETIVEPEVVLDSESPELPPKIMSGTGTGYEIVCQGFNWESNKSGRWYMELKEKAKELASLGFTVIWLPPPTDSVSPEGYMPRDLYNLNSRYGTIDELKDVVKAFHKVGIKVLGDAVLNHRCAEFQNKNGIWNIFGGRLNWDDRAVVADDPHFQGRGNKSSGDSFHAAPNIDHSQDFVRKDIKEWLCWLREEIGYDGWRLDFVRGFWGGYVKDYMDATKPYFSVGEYWDSLSYTYGEMDHNQDAHRQRIIDWISAAGGTAGAFDVTTKGILHAALERCEYWRLSDQQGKPPGVLGWWPSRAVTFIENHDTGSTQGHWRFPHKKEMQGYCYTLTHPGTPSVFFDHIFSDYKTEIGALLSIRKRNGINCRSTVQITKSERDVYAAIIDKKVAMKIGPGHYEPPSDSQKWKSAWDGRDYSIWELEES* 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2579 904 Pfam Alpha amylase, catalytic domain 536 791 IPR006047 GO:0005975
Mal5g2579 904 PANTHER ALPHA-AMYLASE 84 900 - -
Mal5g2579 904 SMART aamy 511 840 IPR006047 GO:0005975
Mal5g2579 904 SUPERFAMILY Glycosyl hydrolase domain 845 900 - -
Mal5g2579 904 CDD AmyAc_arch_bac_plant_AmyA 512 851 - -
Mal5g2579 904 SMART alpha-amyl_c2 841 901 IPR012850 GO:0004556|GO:0005509|GO:0005975
Mal5g2579 904 Gene3D - 845 901 IPR013780 -
Mal5g2579 904 Gene3D Glycosidases 511 844 - -
Mal5g2579 904 PANTHER ALPHA-AMYLASE 3, CHLOROPLASTIC 84 900 - -
Mal5g2579 904 MobiDBLite consensus disorder prediction 405 424 - -
Mal5g2579 904 Pfam Alpha-amylase C-terminal beta-sheet domain 842 900 IPR012850 GO:0004556|GO:0005509|GO:0005975
Mal5g2579 904 SUPERFAMILY (Trans)glycosidases 507 827 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2579 Mal-Chr5 75359453 75368125 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2579 67 900 Glycoside Hydrolase AT1G69830 66.627 0.0 1168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2579 K01176 - gmx:100788193 1459.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g2579 5 75359453 75368125 Mal5g2579 5 75359453 75368125 ECH