Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2472 ATGTTTGTTTTCCTAATTTATGAACTTCTGGAGTTTATGTTTTTTGCACAGTATGCTCACAGAAAGTGCGTCCAACGTTGGTGCAACGAAAAAGGAGACACAACTTGTGAAATATGTCATAAGTCCTATGAACCTGGTTATACTGCTCCACAACCCCGTCCACATCCCGAAGAAACTACCATTGATATAGGAGGAGGCTGGACACTTTCTGGTACACCTTTGGATTTGCGTGATCCTCGACTGTTGGCAATTGCAGAGGCAGAACGCCAATTCTTCGAAGCTGAATATGATGGATATGCTGCTTCTAATGCCAATGGTGCTGCATTTTGTCGTTCAGCTGCTCTAATTTTAATGGCCCTTTTACTCTTGAGGCATGCACTTTCTGTAACGGATGCTGATGCCGAAGATGACCCATCAACTTTTTTCTCCCTTTTCTTGCTTCGAGCTGCTGGTTTTCTCTTACCTTGCTATATCATGGCTTGGGCAATCAGTATCTTGCAAAGAAGGCGACAAAGACAAGAGGCTGCAGCGCTGGCGGCAACCCAAGTTGCCTTCGTGCTACAATCCGGGCAGCATAGGGGTCTGCAGTTCGCCATAGCACCAGCACCATCACCAACAGTGAATCCACACCCACACCAGGAACAAGTGTAG 651 0.4639 MFVFLIYELLEFMFFAQYAHRKCVQRWCNEKGDTTCEICHKSYEPGYTAPQPRPHPEETTIDIGGGWTLSGTPLDLRDPRLLAIAEAERQFFEAEYDGYAASNANGAAFCRSAALILMALLLLRHALSVTDADAEDDPSTFFSLFLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATQVAFVLQSGQHRGLQFAIAPAPSPTVNPHPHQEQV* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2472 216 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 15 45 IPR013083 -
Mal5g2472 216 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 17 200 IPR033275 -
Mal5g2472 216 SUPERFAMILY RING/U-box 17 44 - -
Mal5g2472 216 SMART ringv_2 15 40 IPR011016 GO:0008270
Mal5g2472 216 PANTHER E3 UBIQUITIN-PROTEIN LIGASE MARCH-RELATED 17 200 - -
Mal5g2472 216 Pfam Protein of unknown function (DUF3675) 45 163 IPR022143 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2472 Mal-Chr5 69021597 69023740 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2472 - - gmx:100817542 335.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g2472 5 69021597 69023740 Mal5g2472 5 69021597 69023740 ECH