Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1636 ATGTTTCAACATTTCACTACTTGCTTTACCTTCCTTCATAAGACCAAATCTCTCTTCAACAACTCAAGAAGACCACCCAACAACAAATTTTGTTCCATTTCCGACATATCATCTTCTTTCATTCACAACGAAGAATCCGGCCAATTTCGACAAATTTTCAAGCTTATCGACACCAACAATGACGGTAAAATTTCAACCACAGAGCTCAGTGAAGTGCTTTCGTGTCTAGGATACAACAAATGCACAGCTGCTAAAGAAGCTGAGAGCATGATAAAAGTTTTGGACTTCAATGGAGATGGATTTCTAGATATTGATGAGTTCATGTTTGTCATGAAAGAAGAAGATAGCTATGGCAAAGGAAAAGAGCATGATCTTGATGAGTATTTAATGGATACTTTTCTTGTGTTTGATATTGACAAGAATGGCTTAATCTCACCTAAGGAACTTAGGAGAGTTTTGGTTAATCTTGGTTGTGAAAATTGTAGTTTAAGGGATTGTAAACGTATGATTAAAGGGGTTGATAAGAATGGAGATGGATTTGTGGATTTTGAAGAGTTTAGATCCATGATGAAAATAGGACTTAAAAATTAG 591 0.3553 MFQHFTTCFTFLHKTKSLFNNSRRPPNNKFCSISDISSSFIHNEESGQFRQIFKLIDTNNDGKISTTELSEVLSCLGYNKCTAAKEAESMIKVLDFNGDGFLDIDEFMFVMKEEDSYGKGKEHDLDEYLMDTFLVFDIDKNGLISPKELRRVLVNLGCENCSLRDCKRMIKGVDKNGDGFVDFEEFRSMMKIGLKN* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1636 196 Gene3D - 117 195 - -
Mal5g1636 196 ProSitePatterns EF-hand calcium-binding domain. 137 149 IPR018247 -
Mal5g1636 196 SUPERFAMILY EF-hand 39 191 IPR011992 -
Mal5g1636 196 Pfam EF-hand domain pair 49 112 IPR002048 GO:0005509
Mal5g1636 196 Pfam EF-hand domain pair 127 191 IPR002048 GO:0005509
Mal5g1636 196 ProSitePatterns EF-hand calcium-binding domain. 174 186 IPR018247 -
Mal5g1636 196 ProSitePatterns EF-hand calcium-binding domain. 95 107 IPR018247 -
Mal5g1636 196 ProSiteProfiles EF-hand calcium-binding domain profile. 124 159 IPR002048 GO:0005509
Mal5g1636 196 CDD EFh 128 191 IPR002048 GO:0005509
Mal5g1636 196 ProSiteProfiles EF-hand calcium-binding domain profile. 44 79 IPR002048 GO:0005509
Mal5g1636 196 ProSiteProfiles EF-hand calcium-binding domain profile. 82 117 IPR002048 GO:0005509
Mal5g1636 196 SMART efh_1 165 193 IPR002048 GO:0005509
Mal5g1636 196 SMART efh_1 128 156 IPR002048 GO:0005509
Mal5g1636 196 SMART efh_1 48 76 IPR002048 GO:0005509
Mal5g1636 196 SMART efh_1 86 114 IPR002048 GO:0005509
Mal5g1636 196 PANTHER CALCIUM BINDING PROTEIN 31 193 - -
Mal5g1636 196 Gene3D - 12 116 - -
Mal5g1636 196 ProSiteProfiles EF-hand calcium-binding domain profile. 161 196 IPR002048 GO:0005509
Mal5g1636 196 CDD EFh 48 112 IPR002048 GO:0005509
Mal5g1636 196 ProSitePatterns EF-hand calcium-binding domain. 57 69 IPR018247 -
Mal5g1636 196 PANTHER CALCIUM-BINDING PROTEIN CML25-RELATED 31 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1636 Mal-Chr5 31956537 31957127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1636 49 192 EF-hand Containing Proteins AT1G66400 44.828 2.57e-33 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1636 - - gmx:100799475 271.166