Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1608 ATGATGGCCAGCCCAGAACTTGTGAGTTCAGTTGGAGAGAATATGTCAGTGAATGCTGCCCCCAGGAAGCCTCGGATTTTACTCGCTACTAGTGGAAGTGTTGCTGCTGTTAAATTTGCAAATCTTTGTCATTGTTTCTCTGAATGGGCAGAAGTAAGAGCTGTTGCCACAAAATCGTCTTTGCATTTTATTGAGAGAACAGCAATCCCGAAGGATGTGATTTTGTATACGGACGACGATGAATGGTCTAGTTGGAAGAAACTAGGCGATAGTGTGCTTCACATTGAGCTTCGTAAATGGGCTGATATCATGGTCATTGCTCCATTGTCGGCAAACACTCTTGGCAAGATTGCTGGAGGGTTGTGTGACAATCTACTGACATGTATCGTGCGAGCCTGGGACTACAGCAAGCCATTCTTTGTTGCACCAGCCATGAACACTTTCATGTGGAACAATCCTTTCACAGAGCGGCATCTAATCTCCATTGACGAGCTTGGCATTTCTCTCATTCCACCTGTTACAAAGAGATTAGCTTGTGGGGATTATGGAAATGGTGCAATGGCTGAACCTTCTACCATTTACTCCACTGTAAGGCTCTTTTATGAGTCAAAGGCTCAGCAAGGAAATGGCGATGTTTAA 639 0.446 MMASPELVSSVGENMSVNAAPRKPRILLATSGSVAAVKFANLCHCFSEWAEVRAVATKSSLHFIERTAIPKDVILYTDDDEWSSWKKLGDSVLHIELRKWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYSKPFFVAPAMNTFMWNNPFTERHLISIDELGISLIPPVTKRLACGDYGNGAMAEPSTIYSTVRLFYESKAQQGNGDV* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1608 212 SUPERFAMILY Homo-oligomeric flavin-containing Cys decarboxylases, HFCD 23 200 IPR036551 GO:0003824
Mal5g1608 212 PANTHER HOMO-OLIGOMERIC FLAVIN CONTAINING CYS DECARBOXYLASE FAMILY 14 204 - -
Mal5g1608 212 Pfam Flavoprotein 25 198 IPR003382 GO:0003824
Mal5g1608 212 Gene3D - 23 211 IPR036551 GO:0003824
Mal5g1608 212 PANTHER BNAA01G27100D PROTEIN 14 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1608 Mal-Chr5 31430236 31431380 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1608 K01598 - gmx:100499989 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2596 3 98572712 98573648 Mal5g1608 5 31430236 31431380 PCT
Mal5g1608 5 31430236 31431380 Mal3g2595 3 98570019 98570761 PCT