Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1594 ATGCAAGTGCTTAATCCTTCAATGCTATTTGCACCCCCCAATACAAAAGAAAATGTCATGAATGAAAAAAACCAATGTCATGATACATCTTTTCTACCATGTCAAATTACTAACATACCCTCAGAGTTCATATGGCCAGAGCATGAAAAACCATGTCTAACACCACCAAAACTTCAAGTTCCACCAATTGACTTAAAAGCTTTTCTCTCTAGTGATCCAAAAGCCATTTCAAATGCTTGTTCAAAAGTCAATGATGCATGCAAAAAGCATGGTTTTTTCCTTGTTGTTAACCATGGAGTAGATAAAAAATTAATAGCTCAAGCTCATAAGCTTGTAGATGATTTCTTCTGCATGCAACTATCTGAGAAACAAAGAGCTCAAAGAAAGGTTGGAGAACATTGTGGTTATGCTAATAGTTTCATTGGAAGATTTTCTTCCAAACTTCCTTGGAAGGAGACACTTTCTTTCCGTTACTCTGCTGATAAGTCATGCAGAAGTGTGGAGGACTATTTTGTAAATGTCATGGGAGAAGATTTCAGACAATTTGGGAGTGTGTACCAAGACTATTGTGAAGCTATGAGCAATCTTTCTCTTGGGATAATGGAGCTTCTTGGGATGAGTCTAGGAGTTGACAAAGAATATTTTAAAGATTTTTTTGAAGGAAATGACTCTGTAATGAGATTGAACTACTATCCACCATGTAAAAATCCTGATTTAGCTTTAGGAACTGGACCCCATTGCGACCCTACTTCCTTAACCATTCTCCACCAAGATCAAGTTGAGGGTCTTCAAGTGCTTGTGGATGGAACATGGCACTCAGTTGTTCCTAAAGAAGATGCCTTTGTGGTCAACATTGGTGATACATTTATGGCTCTATCAAATGGGATATTCAAGAGTTGCTTACATAGAGCAGTTGTAAATGACAAAATAGTGAGAAAATCACTAGCATTTTTTCTATGTCCAAATGAAGACAAAGTGGTCACTCCTCCAAAGGAACTAATTACCAAGGAGAATCCAAGGATGTATCCAAATTTCACATGGCCAAGTTTACTTGAATTTACACAAAAACATTACAGGGCTGATGAAAGAACCCTTGATGCTTTTTCAAGGTGGCTACAAGAGAAAAACAACTAA 1134 0.3721 MQVLNPSMLFAPPNTKENVMNEKNQCHDTSFLPCQITNIPSEFIWPEHEKPCLTPPKLQVPPIDLKAFLSSDPKAISNACSKVNDACKKHGFFLVVNHGVDKKLIAQAHKLVDDFFCMQLSEKQRAQRKVGEHCGYANSFIGRFSSKLPWKETLSFRYSADKSCRSVEDYFVNVMGEDFRQFGSVYQDYCEAMSNLSLGIMELLGMSLGVDKEYFKDFFEGNDSVMRLNYYPPCKNPDLALGTGPHCDPTSLTILHQDQVEGLQVLVDGTWHSVVPKEDAFVVNIGDTFMALSNGIFKSCLHRAVVNDKIVRKSLAFFLCPNEDKVVTPPKELITKENPRMYPNFTWPSLLEFTQKHYRADERTLDAFSRWLQEKNN* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1594 377 Gene3D - 30 360 IPR027443 -
Mal5g1594 377 Pfam 2OG-Fe(II) oxygenase superfamily 223 321 IPR044861 -
Mal5g1594 377 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 221 321 IPR005123 -
Mal5g1594 377 SUPERFAMILY Clavaminate synthase-like 32 361 - -
Mal5g1594 377 PRINTS Isopenicillin N synthase signature 83 100 - -
Mal5g1594 377 PRINTS Isopenicillin N synthase signature 246 267 - -
Mal5g1594 377 PRINTS Isopenicillin N synthase signature 281 307 - -
Mal5g1594 377 PANTHER GIBBERELLIN 20-OXIDASE 32 373 - -
Mal5g1594 377 Pfam non-haem dioxygenase in morphine synthesis N-terminal 60 162 IPR026992 -
Mal5g1594 377 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 32 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1594 Mal-Chr5 31148202 31150653 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1594 14 359 Glycosyltransferase AT5G59530 28.732 2.79e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1594 K05282 - gmx:100777224 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g1594 5 31148202 31150653 Mal5g1594 5 31148202 31150653 ECH