Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1578 ATGGCGGACCACACCATCACCTCCCCTCTCCTCCCATCCGACCACTTAATCCTAACCATCAACTCCTCCTCCGACGACACCGACTCCGTCCCCACCACCGGCACGTGTCAAATCTCCAACGCATTTAACGTTGGAGAGTTGACCGTGCCGGAGGCAATAACTGTGGACCCATTCCACAACTATAAAGCAGGGATTAATGGGTTTTACGAATGGGTGAAGACGATTGTGTGTATTCCATTAGCGTTGGTGAGATTGGTGATATTTGGATTGTGTTTGGCGATTGGTTATGTGGCTACTAAGATTGCACTTTATCGTTGGAAGGATAAAGAAAATCCTATGCCTAAGTGGAGGTGTAGGATTATGTGGGTCACCAGAATTTCAGCTAGATTCATTCTCTTTTCTTTTGGCTATCATTGGATAAAGCGAAAGGGAAAGCCTGCCCGAAGGGAAGTTGCTCCAATAATCGTATCTAATCATGTATCTTATATTGAGCCTATCTTCTATTTCTATGAATTATTTCCCACCATTGTGGCATCTGAGTCTCATGACTCCATACCTTTTGTTGGCACGATCATTAGAGCAATGCAGGTCATATATGTTAACAGGTTCTCACAATCATCAAGGAAGCAGGCTGTTAGAGAAATAAAGAGAAGGGCTTCTTGCGATAGATTTCCTCGAGTACTTTTATTTCCTGAGGGAACGACGACTAACGGCCGGAACCTTATTTCCTTCCAACTCGGCGCATTTATCCCTGGGTACCCAATCCAGCCTATAATTGTACGCTATCCTCATGTGCACTTCGATCAATCTTGGGGTAATGTTTCTTTGGGACAGCTTATGTTCAGGATGTTTACTCAATTCCACAACTTCTTTGAGGTAGAATATCTTCCTGTCATTTCACCCCTGGATGATAAGGAAACCGCTGTGCATTTTCGTAAAAGGACTAGCCATGCTATTGCAAGTGCATTGAATACTGTCCAAACTGGACATTCTTATGGAGATATAATGCTTCATATGAAAGCACAAGAAGCAAATCAGGAGAACCCCTCGAGTTATATGGTTGAAATGGCCAAGGTGGAATCGTTATTTCATATCAGCAGCTTGGAAGCTGTGGACTTTTTGGATAAATTCTTGGCTATGAATCCCGATCCCAGTGGTCGTGTTCAATATCATGGCTTTTTGAGAGGTTTAAGACTGAAGGCTTGTCCACTTTCTGAAAAGATATTTTCATTCATTGATGTGGAGAAGTATGGGAAAATTACATTCAGACAGTTCTTGTATGGATCTGCACATGTCATGAAGCAGCCAGGGTTCCATCAAGCCTGTGAAGTAGCCTTTGCTGAGTGTGGCGGTGCATTAAAGGGCTACATCAAGGAAGAAGAATTACGAGATTACATCAAATCTGCTATGCCCAACTGGAATGAAGACGAGGTCCATACTCTTTTTGCATTATTTGACGATGATAATGATGGAAGAATTTACAAGGATGAATTTCTTTCTTGTATGAGAAGAAATCCTCTTCTCGTAGCCCTTTTTACATCTCAATCGCAGCAGAAGGAATCATGTGGTAATGGAGTGCTAGAGATACTGTGA 1593 0.4262 MADHTITSPLLPSDHLILTINSSSDDTDSVPTTGTCQISNAFNVGELTVPEAITVDPFHNYKAGINGFYEWVKTIVCIPLALVRLVIFGLCLAIGYVATKIALYRWKDKENPMPKWRCRIMWVTRISARFILFSFGYHWIKRKGKPARREVAPIIVSNHVSYIEPIFYFYELFPTIVASESHDSIPFVGTIIRAMQVIYVNRFSQSSRKQAVREIKRRASCDRFPRVLLFPEGTTTNGRNLISFQLGAFIPGYPIQPIIVRYPHVHFDQSWGNVSLGQLMFRMFTQFHNFFEVEYLPVISPLDDKETAVHFRKRTSHAIASALNTVQTGHSYGDIMLHMKAQEANQENPSSYMVEMAKVESLFHISSLEAVDFLDKFLAMNPDPSGRVQYHGFLRGLRLKACPLSEKIFSFIDVEKYGKITFRQFLYGSAHVMKQPGFHQACEVAFAECGGALKGYIKEEELRDYIKSAMPNWNEDEVHTLFALFDDDNDGRIYKDEFLSCMRRNPLLVALFTSQSQQKESCGNGVLEIL* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1578 530 CDD EFh 455 503 IPR002048 GO:0005509
Mal5g1578 530 Gene3D - 347 521 - -
Mal5g1578 530 SUPERFAMILY EF-hand 355 514 IPR011992 -
Mal5g1578 530 SMART plsc_2 153 263 IPR002123 GO:0016746
Mal5g1578 530 Pfam Acyltransferase 152 257 IPR002123 GO:0016746
Mal5g1578 530 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 116 325 - -
Mal5g1578 530 PANTHER LYSOPHOSPHATIDYLCHOLINE ACYLTRANSFERASE 1-RELATED 49 518 - -
Mal5g1578 530 Pfam EF-hand domain pair 454 504 IPR002048 GO:0005509
Mal5g1578 530 PANTHER PHOSPHOLIPID ACYLTRANSFERASE 49 518 - -
Mal5g1578 530 CDD LPLAT_LPCAT1-like 128 336 IPR045252 GO:0008374
Mal5g1578 530 ProSiteProfiles EF-hand calcium-binding domain profile. 473 508 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1578 Mal-Chr5 30599500 30614580 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1578 113 306 Acyl Lipid Metabolism Gene Families AT1G80950 32.143 1.89e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1578 K13510 - gmx:100818109 839.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g1578 5 30599500 30614580 Mal5g1578 5 30599500 30614580 ECH