Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1483 ATGGGTGTAGCCTCACGCACATTAGAAATCACGGTTATATCCGGTGAAAATATTCATGTAACCGATGATGCATACGTTGTTGTTCGAGGTGAGTCTCTTAATTGTTACACGACGAAAACCGTGAAAGATAACAGAAATTTTGGGGAAAACTCGAGTTTCCATTCATGGAATGAGAAGTTTTTGTTAAACATGCCATTGCATGCAAGGTCAATCACGTTTGAGGTGCAATGCAAGAAGTTCAAAAGTCTCCGCCCTATTGGGGTGGCAAGAATTGCTCTTTCGGATTTTTTTAATGGTGTCATGCCGGAAAATTGTTCGGGAAATTTTAGTTATAGATTGAGGGATTGGGAAGGGAGGCAAAATGGAGTTATTCATTTTAGTGTGAGGGTGGTTAGGCCGGAGGAAAAAGAAACGGTGGCGAATGGGAAAAATTATGGTGATCGATTAACCGGAATGGATGTTGGGGTCAAGAGCTCTAATGGTGTTGTTGTTGGTGTTCCATTTTGGTGGAATTACTCTAAAATTTGA 528 0.4091 MGVASRTLEITVISGENIHVTDDAYVVVRGESLNCYTTKTVKDNRNFGENSSFHSWNEKFLLNMPLHARSITFEVQCKKFKSLRPIGVARIALSDFFNGVMPENCSGNFSYRLRDWEGRQNGVIHFSVRVVRPEEKETVANGKNYGDRLTGMDVGVKSSNGVVVGVPFWWNYSKI* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1483 175 Pfam C2 domain 7 99 IPR000008 -
Mal5g1483 175 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 132 IPR035892 -
Mal5g1483 175 PANTHER INGRESSION PROTEIN FIC1 5 173 - -
Mal5g1483 175 PANTHER BON1-ASSOCIATED-LIKE PROTEIN 5 173 - -
Mal5g1483 175 Gene3D C2 domain 3 148 IPR035892 -
Mal5g1483 175 ProSiteProfiles C2 domain profile. 1 106 IPR000008 -
Mal5g1483 175 SMART C2_3c 7 105 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1483 Mal-Chr5 28401736 28402263 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1483 - - mtr:MTR_3g064780 268.085