Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mal5g1482 | ATGGAAGGAAAACATCAAGCACGCACATTGGAAATCACCATTATTTCCGGACAAAACATATGCGTCGATCCAAATTCAAAAGCAGAGGATATTTATGTTGTTGTTCGTGCCGAGTCTCTCAATTCTTGCACGACGAAAATGGTGAAGGAAAATGAGGGTTTGGTTTTATGGAATGAGAAATTCATGCTAGATATTCCCCCACATGCAAGGTCATTGACGTTTGAGGTACAATGCAAGAAGTACAAAGGAGCTCGTCCCATTGGAGTGGCTAGGATTGCACTTTCGGATTTTCTTGGTGATAATTTGTCGTTGCAAAGTTGTGTTCAAAATTTGAGTTATGGATTGAGGGGTTGGGATGGTAGGGAAAATGGTGTTATTGATTTTTGTGTGAGGGAGGTGACACAAGAAGGTAATTTGTGTGTAGAAAAAGAACAAGTTAAGGGAAAAATGATGGTGAATGAGAAGAGTTCAAGTCATGTTGTTATTGGGATTCCAATTTTGGGTGTTTTGTTTCTCTTAGGCTATTCTCTTTTCTCTTATGTCCGCAATAAAAAATAG | 558 | 0.3889 | MEGKHQARTLEITIISGQNICVDPNSKAEDIYVVVRAESLNSCTTKMVKENEGLVLWNEKFMLDIPPHARSLTFEVQCKKYKGARPIGVARIALSDFLGDNLSLQSCVQNLSYGLRGWDGRENGVIDFCVREVTQEGNLCVEKEQVKGKMMVNEKSSSHVVIGIPILGVLFLLGYSLFSYVRNKK* | 186 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mal5g1482 | 185 | ProSiteProfiles | C2 domain profile. | 1 | 107 | IPR000008 | - | |
| Mal5g1482 | 185 | PANTHER | C2 DOMAIN PROTEIN | 6 | 184 | - | - | |
| Mal5g1482 | 185 | SMART | C2_3c | 9 | 106 | IPR000008 | - | |
| Mal5g1482 | 185 | Gene3D | C2 domain | 3 | 160 | IPR035892 | - | |
| Mal5g1482 | 185 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 6 | 130 | IPR035892 | - | |
| Mal5g1482 | 185 | PANTHER | INGRESSION PROTEIN FIC1 | 6 | 184 | - | - | |
| Mal5g1482 | 185 | Pfam | C2 domain | 9 | 98 | IPR000008 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mal5g1482 | Mal-Chr5 | 28390814 | 28391371 | Dispersed/Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mal5g1482 | - | - | gmx:100802552 | 192.586 |