Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1480 ATGGGTGTAGCCTCATGCACATTAGAAATCACAGTTATATCCGGCGAAAATATTCATGTGACCGAGGATGCATATGTCGTTGTTCGAGGTGAGTCTCTAAATTGTTACACAACGAAAACGGTGAAAGATAACGGTTGTGGGAAAAATTCGAGTTTTCTTTCATGGGATGAGAAGTTTTTGTTGAACATGCCATTGCATGCAAGGTCAATCACGTTTGAGGTGCAATGCAAGAAGTTCAAAAGTCTTCGCCCAATTGGGGTGGCAAGAATTGCTCTTTCGGATTTTCTTAACGGTGTTATGCCGGAAAATTGTTCGGGAAATTTTAGTTATAAATTGAGGGATTGGGAAGGAAAGCAAAATGGAGTTATTCATTTTAGTGTGAGGGTGGTTGCGCCGGAGAAAAGATCGGAAAACGAAACGGTGGTGAATGGAAAGAGTTATGGTGCTCGGTTAACTGGAATGGATGTTGGTGTCAAGAACTCTAATGGTGTTGTTGTTGGTATTCCGTTTTGGTGGAATTACCCTAACATTATTTGA 537 0.4097 MGVASCTLEITVISGENIHVTEDAYVVVRGESLNCYTTKTVKDNGCGKNSSFLSWDEKFLLNMPLHARSITFEVQCKKFKSLRPIGVARIALSDFLNGVMPENCSGNFSYKLRDWEGKQNGVIHFSVRVVAPEKRSENETVVNGKSYGARLTGMDVGVKNSNGVVVGIPFWWNYPNII* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1480 178 ProSiteProfiles C2 domain profile. 1 105 IPR000008 -
Mal5g1480 178 Pfam C2 domain 7 98 IPR000008 -
Mal5g1480 178 PANTHER INGRESSION PROTEIN FIC1 5 175 - -
Mal5g1480 178 Gene3D C2 domain 3 148 IPR035892 -
Mal5g1480 178 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 130 IPR035892 -
Mal5g1480 178 PANTHER BON1-ASSOCIATED-LIKE PROTEIN 5 175 - -
Mal5g1480 178 SMART C2_3c 7 104 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1480 Mal-Chr5 28381424 28381960 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1480 - - mtr:MTR_3g064780 276.944