Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1479 ATGGAAGGAAACCAACGAGCACGCACCTTAGAAATCACCATTATTTCCGGAAAAAATATATGTGTCGATTGGAATTCAAAGATAGTGGATGTGTACGTTGTTGTTCGTGCTGAGTCTCTGAACTCTTGCACGACAAAAACGGTGAAGGAAAATGAGGATTTGTTCTCATGGAATGAGAAATTCATGTTAGATATTTCCCCACATGCAAGGTTAGTGACATTTGAGGTACAATGCAAGAAGTACAAAGGAAGTCGTCCCATTGGAGTGGCTACGATAGCACTTTCAGATTTTCTTGGTGATAATTTGTTGTTGCAAAGTTGTGTTCAAAATTTTAGTTATGGATTGAGAGATTGGCATGGTAGGAAAAATGGTGTTATTAATTTTTGTGTGACACACGAGGGTAATATGTGTGAGGAAAAAGAACAAGATAAGGGACAAATGAGGGTGAGTTCTAGTGGATTTGAAGATATTGGAATTAATAAAGATAAGAAGAATTCAAGTCATGTTGGGTGTTTTGTTTCTTTTAGGTCATTCTCATTACTCTTTTGTTCGTCGAATGTAATGGATTGA 570 0.3684 MEGNQRARTLEITIISGKNICVDWNSKIVDVYVVVRAESLNSCTTKTVKENEDLFSWNEKFMLDISPHARLVTFEVQCKKYKGSRPIGVATIALSDFLGDNLLLQSCVQNFSYGLRDWHGRKNGVINFCVTHEGNMCEEKEQDKGQMRVSSSGFEDIGINKDKKNSSHVGCFVSFRSFSLLFCSSNVMD* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1479 189 PANTHER INGRESSION PROTEIN FIC1 6 179 - -
Mal5g1479 189 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
Mal5g1479 189 PANTHER C2 DOMAIN PROTEIN 6 179 - -
Mal5g1479 189 SMART C2_3c 9 106 IPR000008 -
Mal5g1479 189 Pfam C2 domain 9 98 IPR000008 -
Mal5g1479 189 Gene3D C2 domain 3 168 IPR035892 -
Mal5g1479 189 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 131 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1479 Mal-Chr5 28377414 28377983 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1479 - - gmx:100802552 176.022