Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1427 ATGATTCACACAGATTCAGCATCTATGGCAAATGCAAAAGAAAGATATGCTGTTGTAACAGGATCAAATAAAGGGATAGGATTGGAAACTGTTAAAAGATTAGCTTCAAATGGAATTAAAGTTGTTCTTACAGCTAGAAATGAGAAAAGAGGGATTCAAGCTTTTGAGAAATTGAAGAAAGAGTTTGAATTTTGTGACCATGTTGTTTTTCATCAACTTGATGTTACTGATCCTTTTAGTATTGAATCATTGGTTGAGTTTGTTAAGAATCAGTTTGGAAGACTTGATATCTTGGTAAACAACGCAGGAATCAATGGTTTCAACGCAGACGATATGGTGGAACCAATTATTAATTGGAGAGAATTGAATCAAACTTATGAGATGGCTGAAAATTGCATAATAACAAATTACTATGGTGGTAAAGAAACTACTGAGGCTTTTCTTCCTCTTCTTCAGTTATCTGATTCACCTGTGATTGTTAATGTTTCCTCAACAGCAGGACTATTAAAGTACATATCAAATGAATGGGCTAGGAGTGTGTTAGATGACACAGAAAATCTAACTGAAGAGCTAATAGATGAAGTACTAAAGGAGTTTCTGAAAGACTTCAAACAAGGTTCACTTGAAAACAAGGGTTGGCCAACATATCTTTGTGCCTATAAAATCTCAAAAGCAGCTGTGAATTCCTACACAAGACTTCTAGCTTATAGACATCCAAATTTATGTATTAATTGTGTTTGTCCTGGTTTTGTTAAAACAGATATGAATAGAAACACAGGTATATTATCTGTTGAAAATGGTGCTGCTAGTGTTGTGAGATTAGCACTAATACCTAGTGGTTCAACTTCTGGTCACTTCTTTGCTCGACAAGATTTGTCTTGCTTTTGA 888 0.3446 MIHTDSASMANAKERYAVVTGSNKGIGLETVKRLASNGIKVVLTARNEKRGIQAFEKLKKEFEFCDHVVFHQLDVTDPFSIESLVEFVKNQFGRLDILVNNAGINGFNADDMVEPIINWRELNQTYEMAENCIITNYYGGKETTEAFLPLLQLSDSPVIVNVSSTAGLLKYISNEWARSVLDDTENLTEELIDEVLKEFLKDFKQGSLENKGWPTYLCAYKISKAAVNSYTRLLAYRHPNLCINCVCPGFVKTDMNRNTGILSVENGAASVVRLALIPSGSTSGHFFARQDLSCF* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1427 295 PRINTS Glucose/ribitol dehydrogenase family signature 93 104 IPR002347 -
Mal5g1427 295 PRINTS Glucose/ribitol dehydrogenase family signature 151 167 IPR002347 -
Mal5g1427 295 PRINTS Glucose/ribitol dehydrogenase family signature 220 239 IPR002347 -
Mal5g1427 295 PRINTS Glucose/ribitol dehydrogenase family signature 16 33 IPR002347 -
Mal5g1427 295 PRINTS Glucose/ribitol dehydrogenase family signature 239 256 IPR002347 -
Mal5g1427 295 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 12 295 - -
Mal5g1427 295 Gene3D - 5 295 - -
Mal5g1427 295 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 220 239 IPR002347 -
Mal5g1427 295 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 165 IPR002347 -
Mal5g1427 295 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 93 104 IPR002347 -
Mal5g1427 295 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 15 282 IPR036291 -
Mal5g1427 295 CDD carb_red_PTCR-like_SDR_c 15 287 IPR045313 GO:0016616
Mal5g1427 295 Pfam short chain dehydrogenase 16 172 IPR002347 -
Mal5g1427 295 Pfam Enoyl-(Acyl carrier protein) reductase 210 259 - -
Mal5g1427 295 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 12 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1427 Mal-Chr5 26370342 26372632 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1427 17 256 Miscellaneous Gene Families AT2G29150 28.340 4.33e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1427 K15095 - gmx:111064653 462.611