Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1422 ATGGCAGAAGCAACAAAAATGTATGCTGTTGTTACAGGAGCAAACAAAGGAATAGGATTTGCAGTATGCAAACAATTGGCTTCTAAAGGGATCACTGTGGTGCTTACTGCAAGAGATGAAAAAAGAGGTCTTGAAGCTGTTGAGAAGCTGAAACAACTTTCTCTGCCTGGTCTTGTGATTTTTCATCAACTTGATGTAATAGATCATGCAAGTATAAGGTCATTTGTAGATTTTATCAAGAATCAATTTGGAAAACTAGATATCTTGGTAAACAATGCTGGAATTCCAGGAGCAGAAGTGGACGGTGAGGCTCTGGCTGCTGCTAATATTGTGGAAAATCGTGGCCAGATTGATTGGAGTAAAATAATAACTCAAACCTATGAACAAACTGAAGCAGGTATTAAAACAAACTACTATGGAGCCAAGGATTTAACTGAAGCATTTATTCCCCTTCTCCAGCTATCAAGCTCACCAAAAGTTGTCAATGTTTCTTCATCCATGGGAAAGTTGGAGAAACTTCCAAATGGATGGCCTAAGGAAGTATTGAGTGATGTTGAAAACCTTACAGAAGAAAAGATTGACGAAGTTTTGAATCAATTTCTAAAGGATTTTAAAGAGGGTTCACTAGTAGAAAACAAAGGTTGGCCTATTAATAGCATGTCTACATACATTATCTCAAAAGCTGCTCTAAGTGCTTACACAAGGGTTGCAGCAAAGAAGTATCCATCAATATGCATCAATGCAATTTGTCCTGGCTTTGTGAAAACAGATATAAATTATAATACAGGTTTATTAACACCTGATGAAGGTGCTGAATCAATTGTGAGGTTGGCATTGCTATCTGATGGTGGTACTTCTGGCCTCTTTTTTGTTAGAAGTGAAGAGAAACCGTTTTGA 897 0.3746 MAEATKMYAVVTGANKGIGFAVCKQLASKGITVVLTARDEKRGLEAVEKLKQLSLPGLVIFHQLDVIDHASIRSFVDFIKNQFGKLDILVNNAGIPGAEVDGEALAAANIVENRGQIDWSKIITQTYEQTEAGIKTNYYGAKDLTEAFIPLLQLSSSPKVVNVSSSMGKLEKLPNGWPKEVLSDVENLTEEKIDEVLNQFLKDFKEGSLVENKGWPINSMSTYIISKAALSAYTRVAAKKYPSICINAICPGFVKTDINYNTGLLTPDEGAESIVRLALLSDGGTSGLFFVRSEEKPF* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1422 298 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Mal5g1422 298 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 166 IPR002347 -
Mal5g1422 298 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 223 242 IPR002347 -
Mal5g1422 298 Pfam Enoyl-(Acyl carrier protein) reductase 212 261 - -
Mal5g1422 298 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 1 298 - -
Mal5g1422 298 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 281 IPR036291 -
Mal5g1422 298 Pfam short chain dehydrogenase 9 170 IPR002347 -
Mal5g1422 298 PRINTS Glucose/ribitol dehydrogenase family signature 242 259 IPR002347 -
Mal5g1422 298 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Mal5g1422 298 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Mal5g1422 298 PRINTS Glucose/ribitol dehydrogenase family signature 223 242 IPR002347 -
Mal5g1422 298 CDD carb_red_PTCR-like_SDR_c 8 298 IPR045313 GO:0016616
Mal5g1422 298 Gene3D - 2 298 - -
Mal5g1422 298 PANTHER (+)-NEOMENTHOL DEHYDROGENASE-RELATED 1 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1422 Mal-Chr5 26256050 26258823 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1422 7 168 Miscellaneous Gene Families AT2G29150 31.548 1.15e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1422 K15095 - gmx:100803877 456.062