Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1388 ATGAGGGGTGTCAAAATTAGTCCAAATTCCATTCAAACCATGGTTTTTCTTCTAATTCTTGTATCAACTTTTTGCCTAAGCATTGAAGCTTCAACCTCCAAACCAAGTGGAAGAATATCTGGAAAAAGGTTAAAAATAGGACATCGTAATAAAGCAATCTTAACGCTTAATAGCTTTGAAAAAGGTGGAGATGGAGGAGCAGCATCAGAATGCGACAACAAGTTTCATTCTGACAAGACACTTGTTGTAGCATTGTCAACTAATTTTTTCAACCACAAAAAAAGGTGTTTGAAAGAGATTACTATTTTTGGTAATGGTAAAAGGGTCAATGCAAAGGTTGTTGATGAGTGTGATTCTAAAAGAGGGTGTAAAAACAATATTGTTGATGGTTCTGCTGCTGTCTGGAAGGCTTTGGGTGTGCCTGAAAAGAATTGGGGTGAAATGAACATTTTCTGGTCAGATGCTTGA 468 0.3675 MRGVKISPNSIQTMVFLLILVSTFCLSIEASTSKPSGRISGKRLKIGHRNKAILTLNSFEKGGDGGAASECDNKFHSDKTLVVALSTNFFNHKKRCLKEITIFGNGKRVNAKVVDECDSKRGCKNNIVDGSAAVWKALGVPEKNWGEMNIFWSDA* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1388 155 PANTHER RIPENING-RELATED PROTEIN 2-RELATED 46 155 IPR039271 -
Mal5g1388 155 SUPERFAMILY Barwin-like endoglucanases 63 153 IPR036908 -
Mal5g1388 155 Gene3D - 55 154 IPR036908 -
Mal5g1388 155 PANTHER RIPENING RELATED PROTEIN FAMILY 46 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1388 Mal-Chr5 24793641 24794108 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1388 - - mtr:MTR_8g031150 240.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2682 3 99870847 99871242 Mal5g1388 5 24793641 24794108 PCT