Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1375 ATGGAGCATTTAGATGACGGGGAAGCATCAGAAAATAATGTTGATGAAGTAGAAGCCACTAATAATACTCCACTGATTCGTGGCCTTCCAGATGATATTTCTCTTTTGTGTCTGGCAAGAGTTCCTAGAAAATATCATTCAGTCCTGAAGGCTGTCTCAAAAAGATGGAGGGACTTAGTTTGCAGCGAAGAGTGGCTTGACTATCGTAGAAAGCATAAACTTGATGAGACATGGATCTATGCTTTATGCAGGGACAAGTTGGATCATGTTTGCTGTTATGTTTTGGATCCAACCTCGATAAAAAAATCCTGGAAAATCATTCATGGGCTTCCTCTTCACATCGTGAGAAGGAAAGGCATGGGTTTTGAAGCTTTGGGAAATAAGCTCTTCTTATTGGGTGGCTGTAGCTGGTCTGAAGATGCGACTAACGAGGTTTATTCATACAATGCTTCTTTGAACTCGTTTGTTGAAGCTGCTTCGTTGTCAACTGCTAGGTGTTACTTTGCTTGTGAAGCAATGGACGAAAAACTATATGCTATTGGTGGCATAGGTTCAAATTCAAGCGATCCTCATTCTTGGGATACTTTTGATCCTTGCACAAATGGTTGGACATCTCACAGAGATCCTAATATTGTTCCCGAAATTGAAGATTCAATGGTTATGGACGGAAAAATATACATCCGATGTGGTAAATCTCCTTTAACACCTCATGTCTATGCTGTCGTATATGAACCCTCAAATGGCACGTGGCAGCATGCAGATGCAGACATGGTTTCAGGATGGAGAGGTCCTGCAGTTGTTGTCGACGGAATCCCTTTTGTCTTGGATCAGAGTTCGGGTACTAGGTTGACAATGTGGCATAAAGAGAGACGCGAGTGGATACTGGTCGGAAAGTTGTCACCGTTGCTTACAAGACCACCCTGCCAACTTGTTGCAGTTGGTAAAAGCATTTATATTATTGGAAAAGGGCTTAGCACTGTGGTTGTTGATGTTGGTGATATTGGAAATATGGGAAGGTTGATGGTGGGTTCTTCTATACCAAAATTAGTCTCTGATTACAATGTAATTAGTTGTAAATGCTTATCAATCTGA 1092 0.4139 MEHLDDGEASENNVDEVEATNNTPLIRGLPDDISLLCLARVPRKYHSVLKAVSKRWRDLVCSEEWLDYRRKHKLDETWIYALCRDKLDHVCCYVLDPTSIKKSWKIIHGLPLHIVRRKGMGFEALGNKLFLLGGCSWSEDATNEVYSYNASLNSFVEAASLSTARCYFACEAMDEKLYAIGGIGSNSSDPHSWDTFDPCTNGWTSHRDPNIVPEIEDSMVMDGKIYIRCGKSPLTPHVYAVVYEPSNGTWQHADADMVSGWRGPAVVVDGIPFVLDQSSGTRLTMWHKERREWILVGKLSPLLTRPPCQLVAVGKSIYIIGKGLSTVVVDVGDIGNMGRLMVGSSIPKLVSDYNVISCKCLSI* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1375 363 SMART kelc_smart 128 175 IPR006652 GO:0005515
Mal5g1375 363 Gene3D - 70 336 IPR015915 GO:0005515
Mal5g1375 363 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 13 347 - -
Mal5g1375 363 Pfam Kelch motif 164 203 IPR006652 GO:0005515
Mal5g1375 363 Pfam Kelch motif 116 162 IPR006652 GO:0005515
Mal5g1375 363 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 13 347 - -
Mal5g1375 363 Pfam F-box domain 29 62 IPR001810 GO:0005515
Mal5g1375 363 SUPERFAMILY Kelch motif 89 324 IPR015915 GO:0005515
Mal5g1375 363 SMART fbox_2 29 68 IPR001810 GO:0005515
Mal5g1375 363 SUPERFAMILY F-box domain 24 79 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1375 Mal-Chr5 24643031 24645128 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1375 29 304 Miscellaneous Gene Families AT4G33900 25.676 1.44e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1375 - - gmx:100798211 568.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g1375 5 24643031 24645128 Mal5g1375 5 24643031 24645128 ECH