Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1369 ATGGACCACAAAGAAGAAGTATTCCAGTTTCTCGGAAGCGTTCCGTTACTACAGAGGTTACCTAGTTCGTCTATAAGGAAGATATCAGAGCTTGTGATTGTGAAACACTATGAGCGAGGGGAGTATGTTGCTCGTGAGGGTGAACCAGGAGATGGCACTTACTTCATATGGGATGGAGAGGCTGAGGTTGTTGGATCTGTTAGTGACAATGATGAAAATCGTCCAGAGTTCCAATTGAATAAATATGACTACTTTGGTTGTGGTTTGTCAAATACAGTTCATCTCACAGATGTTGTTGCTTTGTCAAAGCTAACATGCTTAGTGCTGCCTCGGAAGCATGTGGCACTGCTATGGCCAAAGTTTATATGGACCGCAGAAAAAAGTCCTGAGAGACCCTCGTCTGTGGAGAATATATTGCAATTAGAACCATTAGAGGTAGATGTCTTCCAAGGAATCACTCTTCCAGATGCTCCAAGATTTGGAAAGGTGTTTGGGGGACAGCTGGTTGGACAGGCACTAGCTGCAGCATCAAAATCTGTTGACCGTCTTAAGTTACTTCATAGTTTGCATTCCTATTTTCTTCGCATAGGAGACTTAAACATGCCTATTAGATATCAAGTTCATCGCATCCGCGACGGAAAGAGCTTTGCTATACGGAAAGTGGATGCAATGCAAAACGGAAATGTCATATTCACTTTGCTGGCTTCATTTCATAGACAAGAGTCAGGATTTGACCACCAGGAAGTAACTATGCCATCTGTCCCTGCACCAGAAATGCTTCTGCCATTAGAAGAGCTACGGGAGAGACGTCTAACTGACCCTCGCTTGCCAATGACTTACCGGAACAAAGTGGTTACTACTGAGTTCATCCCCTGGCCTATAGAGATACGGTTCTGTGAACCTAAAATTGCAACAAATCAGACAAAATCTCCTCCCAGTTTGACATACTGGTTTCGATCGAAGGAAAAAATTTCAGATGATCAGGCCTTGCATAGGTGTGTGGTAGCATATGCTTCAGATCTAATATTTCTTCAAGTAAGTTTGAATCCACATCGTGGGAAAGGTTTCAGGGCACGTGGTGTTAGTCTGGACCATGCAATGTGGTTTCACCGACCCTTAAAAGCTGATGAGTGGGTGCTATTTGCGATCTTCACTCCTAGTGCCTATGAAGCACGTGGCTTTGTCATAGGGCAAATGTTCAATCAGAAGGGAGAGCTTCTTGCAACATTGATTCAAGAAGGTCTAACCAGGAATGCTAATTTACAAATTCCACCCATCAAATCTAAGCTGTGA 1293 0.4346 MDHKEEVFQFLGSVPLLQRLPSSSIRKISELVIVKHYERGEYVAREGEPGDGTYFIWDGEAEVVGSVSDNDENRPEFQLNKYDYFGCGLSNTVHLTDVVALSKLTCLVLPRKHVALLWPKFIWTAEKSPERPSSVENILQLEPLEVDVFQGITLPDAPRFGKVFGGQLVGQALAAASKSVDRLKLLHSLHSYFLRIGDLNMPIRYQVHRIRDGKSFAIRKVDAMQNGNVIFTLLASFHRQESGFDHQEVTMPSVPAPEMLLPLEELRERRLTDPRLPMTYRNKVVTTEFIPWPIEIRFCEPKIATNQTKSPPSLTYWFRSKEKISDDQALHRCVVAYASDLIFLQVSLNPHRGKGFRARGVSLDHAMWFHRPLKADEWVLFAIFTPSAYEARGFVIGQMFNQKGELLATLIQEGLTRNANLQIPPIKSKL* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1369 430 PANTHER ACYL-COA THIOESTERASE 52 420 - -
Mal5g1369 430 ProSiteProfiles cAMP/cGMP binding motif profile. 16 86 IPR000595 -
Mal5g1369 430 Pfam Cyclic nucleotide-binding domain 35 114 IPR000595 -
Mal5g1369 430 CDD Thioesterase_II_repeat1 316 415 - -
Mal5g1369 430 CDD Thioesterase_II_repeat2 147 239 - -
Mal5g1369 430 Pfam Thioesterase-like superfamily 162 415 - -
Mal5g1369 430 Gene3D - 130 420 IPR042171 -
Mal5g1369 430 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 134 243 IPR029069 -
Mal5g1369 430 SMART cnmp_10 16 140 IPR000595 -
Mal5g1369 430 Gene3D Jelly Rolls 1 126 IPR014710 -
Mal5g1369 430 SUPERFAMILY cAMP-binding domain-like 5 119 IPR018490 -
Mal5g1369 430 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 249 418 IPR029069 -
Mal5g1369 430 PANTHER ACYL-COA THIOESTERASE 52 420 IPR003703 GO:0006637|GO:0047617
Mal5g1369 430 CDD CAP_ED 16 113 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1369 Mal-Chr5 24563936 24585781 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1369 3 430 Acyl Lipid Metabolism Gene Families AT1G01710 64.252 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1369 K01068 - gmx:100803260 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g1369 5 24563936 24585781 Mal5g1369 5 24563936 24585781 ECH
Mal3g2694 3 100234074 100240296 Mal5g1369 5 24563936 24585781 PCT