Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1367 ATGTCCAATTCATATCCTTATGTTGATCTTCCTATTATAGACATTTCTGAACCATTAAAACCATCTTCTTTAACAACTCTCTCTAAAGCATGCAAAGATTGGGGATTTTTCCATATAATTAATCATGAAATCTCAAAAGAACTTTGTAGCCAGCTTCATTCATTATCTAAATACATTTTTAACCTTCCTTCTGATACTAAACTTAAACTTGGTCCTTTCTCTTCTATAAAATCTTATACACCTCATTTCATTGCTTCTCCATTCTTTGAGAGTCTTAGAGTTGATGGACCTAACTTCTATGTTTCTGCTAAGAGTTCTGAAGATGTTTTGTTTGAAAAACAGAACTCAAAATTCAGTGAGACACTAGAGAACTATTGTAGTAAGATGGCAGACTTATCAGAAAGAATTTTAAAGCTTGTGTTAATAAGCTTAGGAGAAGGTTTTGAGAAGCTATTTTATGATTCTCAATTCAAAAAGTGTCAAGGTTACTTAAGAATAAACAACTATACATCACCAGAAATTTTGGATATGGAAGATCAAGTTGAGGGACTAGGAATGCACACTGACATGAGCTGCATTACTATCTTATACCAAGATGAAATTGGAGGACTTCAAGTGAAAACACATGAAGGAAAATGGATTGATATAAGTCCTTCTGAAGGGTCCTTAGTGGTGAATATAGGTGATATGATGCAAGCTTGGAGCAATGATAAGTTAAGATCTTCTGAACATAGAGTTGTTTTGAAACAACCTGTGGATAGATTTTCTTTGGCTTTCTTTTGGTGTTTTGAGGATGAGAAAGTGATTATGGCACCTGATGAAGTTGTTGGAGATGGAAATAAGAGAATGTATGATCCTTTTGTGTGTTTAGATTATTTGAAGTTTAGAGAGAATAATCAAAGAGGAAGATTTGAAAAGGTTGGTTATACATTTAGAGAGAATAATCAAAGAGGAAGATTTGAAAAGGTTGGTTATACAGTTAGAGATTTTGCTGGAATTAAGTCTTAA 1008 0.3294 MSNSYPYVDLPIIDISEPLKPSSLTTLSKACKDWGFFHIINHEISKELCSQLHSLSKYIFNLPSDTKLKLGPFSSIKSYTPHFIASPFFESLRVDGPNFYVSAKSSEDVLFEKQNSKFSETLENYCSKMADLSERILKLVLISLGEGFEKLFYDSQFKKCQGYLRINNYTSPEILDMEDQVEGLGMHTDMSCITILYQDEIGGLQVKTHEGKWIDISPSEGSLVVNIGDMMQAWSNDKLRSSEHRVVLKQPVDRFSLAFFWCFEDEKVIMAPDEVVGDGNKRMYDPFVCLDYLKFRENNQRGRFEKVGYTFRENNQRGRFEKVGYTVRDFAGIKS* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1367 335 Gene3D - 2 295 IPR027443 -
Mal5g1367 335 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 156 264 IPR005123 -
Mal5g1367 335 Pfam 2OG-Fe(II) oxygenase superfamily 165 261 IPR044861 -
Mal5g1367 335 SUPERFAMILY Clavaminate synthase-like 4 300 - -
Mal5g1367 335 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 2 310 - -
Mal5g1367 335 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 2 310 - -
Mal5g1367 335 Pfam non-haem dioxygenase in morphine synthesis N-terminal 10 78 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1367 Mal-Chr5 24509438 24539320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1367 6 284 Glycosyltransferase AT5G59530 28.425 2.05e-22 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1367 - - gmx:100782766 552.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g1367 5 24509438 24539320 Mal5g1367 5 24509438 24539320 ECH
Mal5g1367 5 24509438 24539320 Mal3g2700 3 100286905 100288275 ECH
Mal3g2700 3 100286905 100288275 Mal5g1367 5 24509438 24539320 PCT