Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1360 ATGCAAAGGTATCATGCTGGCAGCTGCGCTAGTGCAGTTAATAACAGTACCATAAGCGGACCTTCCAGGGATACTGGAAGATCTGATTCTTCTTTTCCGGCTCACTTCCCTGTAAATTCAAGGTCTTCCATTCATAAATCGAATTCCGATTTGATAACCATGGGCTCAAGAAGTAAACAAAATATTAAAGGACAACCAAAGCGTTTTCCTGTTATGCGGCGACAACCACAGTTGAACATAAACCCATACAAGTTGAAGTGTGATAAAGAACCTTTGAACTCTAGGCTTGGGGCTCCAGATTTTCTTCCCCAAACACCAAACTGCCCTGAGGAGACTCTGACCAAAGAGTATTTGCTATCTGGATATAGAGATACAGTTGAGGGACTTGAGGAAGCTAGAGAAATTTCACTGACTCAGGTTCCACATTTTAACAAGCCAATTGTTCATAATTGCAGAGAGGCTATTAAAAAACGTCTAAGGGCCATCAATGAATCTCGTGCTCAGAAGCGGAAGGCTGGTCAAGTATATGGTGTGCCTCTTTCGGGATTGCAACTTGCTAAGCCTGGTATTTTCCCTGAAGTAAGGCCGTGTGGTGAGGACTTCAGGAAGAAATGGATTGAGGGCCTATCTCAACCGCACAAGCGGTTATGCACTTTGGCTGACCATGTTCCTCATGGTTATAAAAGGTCATCACTTTTGGAGGTACTTATCAGGAATAATGTTCCATTGCTAAGGGCCACTTGGTTTGTAAAGGTTACTTACCTGAATCAGGTTAGACCAGGTTCGGTTGGCATTTCTGGGACTGCTGACAAAATTCAGCCGTCTCGTACAGAGATTTGGACCAAAGATGTTATCCATTACTTACAAACTCTGCTCGATGAGTTTTTCTCAAAAAATTCTTCTCTTCAGAATCGAGAGCGGTCACCACAAATGCCTTATGCTGGAACACTGATGCACAAAAGTGATCCGTTATTATCCTTTTCTGCTGGTGAAGAACCATCTTTACATTTTAGATGGTGGTATGTTGTTCGACTTTTGCAATGGCACCATGCTGAAGGGCTGATTCTTCCTTCTCTTGTTGTTGATTGGGTTTTGAATCAACTACAGGAAAAAGATCTGCTTGAGGTTTGGGAGGTGTTATTGCCTATTATATATGGCTTCTTAGAAATTGTTGTTCTGTCTCAAACCTATGTACGCGCACTTGCTGGATTAACTCTTCGTGTCATTCGTGATCCAGCTCCAGGTGGATCAGATCTAGTAGATAATTCCAGAAGGGCATATACAACATATGCTCTGATCGAGATGCTCCAATATTTAATACTTGCAGTGCCGGATACTTTTGTCGCCTTGGATTGCTTTCCTTTACCATCCTCTGTAGTCTCACATACAACGAACGATGGCAGTTTTGTATTAAAATCATCTGAAACTGCAGGGAAGATAAAAAATAGTTCAGATGATTTTGGTCGCATTGTTTTATGTATTCAGAAACGTGCAGAAGATCTTGCCAAGGCTGCAGGCCCTGGCAATCCAGGTCATTGTCTTGCTAAGGTCGCGAAAGCCTTGGATAAATCTCTTGTGCTTGGTGATTTACGTGAAGCATACAAGTTTCTTTTTGAAGATTTTTGTGATGGAACTGTATCTCAAGGTTGGATTGCGAAAGTAAGCCCTTGCTTAAGGTTATCTCTGAAATGGTTTGGGACTGTAAACACATCTCTTATACATTCAGTGTTTTTCCTCTGCGAGTGGGCAACATGTGATTTTAGGGATTTTTGTACTACCCCTCCTTGTGACATAAAGTTTACAGGTAGGAAAGATCTTTCCCAAGTGCATATAGCAGTTAGACTTTTGAAGATGAAACTGAGGGATGTGAAATCTTCACTAAGACGAGCTAAACGAAGCATTCACAGAGCTAGTTATGTTGCAAAACATGAAAGTCAGAGGCATAATCAGAATTACATTACTACTGGTTCTTCAGTTATATCTGAAAGCCCAGGTCCTCTCCATGATATTATAGTTTGTTGGATTGATCAGCATGTGGTGCATAAAGGGGAAGGTCTCAAGCGCCTACATTTATTTGTAGTTGAACTGATACGTGCAGGCATCTTTTACCCCTTGGCATATGTACGCCAGTTGATAGTGAGTGGGATCATGGATATGGATGTCAATGTGGTCGATGTGGAGCGGCGAAAGAGACACTCTCACATCTTAAAGCAGCTGCCTGGGGACTTTATGCGTGATGCTTTGACAGAATCTGGGATTGCTGAAGGGACGCAGCTCATTGAAGCCTTGCAAACTTACTTGACTGAACGCCGCCTCATACTTCGTAATTCTCCTAGTGAGCCCCGTGACGGTGCCAATGCCAATAATGCCAAAATACCTGTTTTGAAGCGAAAACGTCATCCAGCTTCTTCAAAGGATGGGACTTCTACAGTGTCAACTGATCAGTGGAAAACTGTTCAAAGCACAATATCTTCTAAAAGTGCAAAGGATGGTGCTAGCGTTGAAGAACTTAAAGAAACCATCTCAGTACTGTTACAACTACCTAATAGTTTATCTAATCTAAACTCCACAGGATGTGATGAATCTGAAGGCAGTGTTAGAAAACCTACCTGGCCTCATAATGGCAAAATTGAACCAGTGGAGGGCACACCTGGTTGTGAAGAATGTAGAAGAGCAAAGAGACAAAAGTTAAGCGAGGAAAGAAGCTCATTTGTTCCAGGTGATGATGATACATGGTGGGTGAAGAAGGGGTTGAAATCCACCGAACCTCTCAAAGTTGACCAACCTCAAAAGACAACCAAGCAGGTTACTAAGAGTCGTCAAAAGAATGTGCGTAAAATGAGTCTTTCTCAACTGGCAGCTTCTAGAATTGAGGGGAGCCAAGGGGCATCAACTAGTCACATGTGTGAGAATAAAGTAAGCTGCCCTCACCATAGAACTCCTGTAGATGGAGATGCGCTAAGGTCTGTGGATAGCATGCGAACATGCACCTCTAGGGATATTGTTTTCATTGGAAAAGCACTAAAGAAGCTTCGTTTTGTTGAGAAAAGGGCTGTAGCAGCTTGGTTGCTGACCGTTGTTAAGCAGGTGATTGAAGAGACTGAAAAAAATATTGGTAAAGTTGGACAATTTGGCAGGGCTTATTCTATGGTGGATGATAGAAACTCAATACGGTGGAAACTTGGCGAAGATGAACTTTCTGCGATACTTTATTTGATTGACATCTCTGATGATTTGGTATCAGCTGTCAAGTTTCTCCTTTGGTTGATGCCAAAGGTTCTCAGTAGCCCTAATTCTACAATTCATAGTGGGAGGAATGTTCTGATGCTACCAAGAAATGTGGAAAACCAAGTTTGTGATGTGGGAGAGGCTTTTCTGCTATCATCACTTAGAAGGTATGAGAACATTCTTGTTGCGGCAGACCTTATTCCTGAAGCTTTGTCTTTTACAATGCGTCGTGCGGCCACTATTATTGCTTCTAATGGAAGGGTGTCAAACTCAGGCGCCATAGCTTTTACTCGGTATTTATTGAAAAAATACAGTAATGTTGCTAGTGTCATTGAGTGGGAGAAAACTTTCAAGTCTACATGTGACGCAAGACTCTCCGCTGAACTTGAGTCTGTTAGGTCAGTCGATGGAGAGTTGGGGTTGCCCTTTGGAGTTCCGGCAGGAGTTGAGGACCCGGATGATTTTTTCCGTCAGAAGATAAGTGGCAGCCGTTTACCTTCAAGAGTAGGTGCAGGCATGAGAGACATAGTGCAACGTAATGTTGAAGAGGCGTTCCAATATCTTTTTGGAAAAGATAGAAAGCTCTATGCTGCTGGCACTCCAAAAGGTCATGCTTTAGAAAAATGGGATAATGGATATCAAATTGCTCAACAAATTGTTATGGGTTTGATCGACAGTATAAAGCAGACTGGCGGTGCTGCTCAAGAAGGGGATCCCTCTTTGGTATTGTCTGCCGTTTCTGCAATTGTTGGCAGTGTGGGTCCAACTTTAGCCAAAATGCCTGATTTTTCATCTGGCAATAATCAGTCAAGTATAGTGTCATTGAACTATGCCAGATGCATTCTGCGAATGCATATAACCTGTCTGCGCCTACTTAAGGAAGCCCTAGGGGAACGCCAAAGCCGTGTGTTTGATATTGCCCTTGCAACCGAAGCTTCTAATGTTTTTGCCGGTGTTTTTGCTCCTAGTAAAGCATCTCGAGCTCAGTTTCAAATATCTTCTGCTGAAGTCCATGATACTAGTGCCACTAATTCAAATGATGTGGGAAACAACTCTATTAAAACTGTGGTTACAAGAGCAACAAAAACTGCCGCTGCTGTTTCTGCGCTTGTTGTTGGTGCAGTTATATATGGTGTTACCAGCCTGGAAAGAATGGTTACCATTCTCAGGTTAAAGGAGGGGCTTGATGTGATACAATGTATTAGAACCACAAGATCCAATTCAAATGGGAATGCCCGTTCTGTCGGGGCTTTTAAGGCAGATAGTTCAATCGAAGTTCATGTCCACTGGTTTAGATTGCTTGTTGGAAACTGCAGAACCCTCTGTGAAGGATTAGCGGTGGACCTCTTGGGTGAACCATCTATTTCAGCTCTTTCAAGGATGCAACGTATGCTTCCTTTAAGTCTGATTTTTCCGCCTGCCTATTCAATATTTGCATTTGTTAGATGGAGGCCATTCATTCTGAATGCTAATGTCGCAGTTCGTGAAGACATGACTCAACTTTATCAGTCTCTAACAATGGCTATAGCTGATGCTATAAAACATTCGCCTTTTCGTGATGTATGTTTTCGAGACTGTCAGGGGCTTTATGATCTTATGGCTGCAGATGGAAGTGACGCTGAATTTGCAGCCCTGCTGGAGTTGAATAGCTCCGATATGCATTTAAAATCGATGGCTTTTGTTCCTCTTCGTTCTAGGCTTTTTCTGAATGCCATGATTGATTGTAAGATGCCCCCATCTATTTTTACACAGGATGATGTGAAACGTGTTTCTGGACCCGGTGAATCTAAAATTAAGTTTGCAAATGGTGATTCTAAGCTTCCGGATAAGCTCATGCATGTTTTGGATACTTTGCAGCCTGCCAAATTTCACTGGCAGTGGGTTGCACTCAGGCTGATATTAAATGAACAAACCCTCATCGAAAAACTGGAACATGACGTGTCTTTATCTGAGGCCATACAGTTGGCCTCGCCTAGTCCGGATAAGGCTGCTGCTGCTGCTACCGAGAAGGAGAATAATTTCATCCAAATACTTCTCACTAGGTTACTGGTTAGACCTGATGCTGCACCTCTTTTTTCGGAGTTGGTTCATCTCTTTGGTAGGTCACTACAGGATTCAATGCTGTTGCAAGCTAAATGGTTCCTTGTAGGCAATGATGTCCTCTTTGGTCGGAAGACCATTAGGCAAAGGCTTCATAACATTGCCAAGAGTGAAGAACTTTCTGCTAAGACCCAGTATTGGGAACCGTGGGGTTGGTGTAGTCCGTGTACTGATCCAGTGACTATCAAAGGGGATAAAAAGAAGTTTGATGCGGCATCACTTGAAGAAGGAGAAGTTGTCGATGAGGGGATAGATATGAAAAGGAGCTTAAAAGGGCTCTCTCATGTGTCTCAAGTCTTTGACTCTGAAAGCTCAAGAATAAACCAGCAACATGTGACTGAGAGGGCTCTTATTGAGTTGCTTCTTCCTTGCATAGACCAAAGCTCTGATGAATCCCGTAATTCCTTTGCTAATGATATTATAAAACAATTAGGACAGATAGCTGAAGTTACAGGTGGAGGTAAGCCAGTGGGAACTACTCCTCCTGGGGTTGAAGGCCAGACAAATAAAGCAAATAATACCAGGAAAGGTATAAGAGGTGGCAGCCCTGGATTAGCTAGGCGACCAGTAGTTGCAACAGATTCTTCTCCATCTCCTGCAGCCCTACGTGTTTCAGTGTCACTTCGTTTGCAGTTACTCCTGAGATTTCTTCCTATTCTTTGCACCGGAAGGGAGCCATCTGTGCGGAACATGAGAAATACGCTGGTCCCTATAATTCTTCGTCTCCTGGGCAGCCGGGTTGTGCATGACGATGCATATATTTTGTCAAATTCCGTACATTCTAAGAAGGATTTAGAGTCGTCTTCTGAAGCTGCTTCTGCTGCATTTGTAGACTTTTCTGCTGAGGGTCTATTTGATCGTTTGCTGTTAGTTTTACATGCGTTGTTGAGTAGTTATCCTGCAAGTTGGCTTAGGCTGAAACCTGGTTCGAAGTCTATCAATGAATCTACGAAGGAATTTTCTGGATTTGACCGCGGATTTTTGGAGAGTATGCAGAATGAATTGGACAGTATGCAACTGCCTGATACTATCCGGTGGCGTATCCAAGCTGCAATGCCTGTACTTTTTCCCTCTACGCAGAGCTCTTTCTCCTGCCAGCCTCCACCTGTACCTACTTCTGCTGTTGCTTGTCTGCAAGCCAGCAATACAATTCCTGGCTTTAACTCCAGTAGTTCAGCTAACCCCCCTCTCAAGAACCCAGTTCTATCAAGGGTTGCAGCCAATGCATCAGCAAAGTCAAAACAACAGGACAGTGAATTGGATATTGATCCTTGGACGCTTTTAGAAGACGGAGCTGGATCTTGCCCTTCTGCAAGTAATATTGCTAGCATAGGTGGTGGTGACCATGCTAACGTTCGAGCTGCAAGCTGGCTTAAAGGGGCTGTAAGGGTGAGAAGGACAGACCTCACATATGTTGGTGCTGTGGATGATGATAGTTGA 6768 0.4322 MQRYHAGSCASAVNNSTISGPSRDTGRSDSSFPAHFPVNSRSSIHKSNSDLITMGSRSKQNIKGQPKRFPVMRRQPQLNINPYKLKCDKEPLNSRLGAPDFLPQTPNCPEETLTKEYLLSGYRDTVEGLEEAREISLTQVPHFNKPIVHNCREAIKKRLRAINESRAQKRKAGQVYGVPLSGLQLAKPGIFPEVRPCGEDFRKKWIEGLSQPHKRLCTLADHVPHGYKRSSLLEVLIRNNVPLLRATWFVKVTYLNQVRPGSVGISGTADKIQPSRTEIWTKDVIHYLQTLLDEFFSKNSSLQNRERSPQMPYAGTLMHKSDPLLSFSAGEEPSLHFRWWYVVRLLQWHHAEGLILPSLVVDWVLNQLQEKDLLEVWEVLLPIIYGFLEIVVLSQTYVRALAGLTLRVIRDPAPGGSDLVDNSRRAYTTYALIEMLQYLILAVPDTFVALDCFPLPSSVVSHTTNDGSFVLKSSETAGKIKNSSDDFGRIVLCIQKRAEDLAKAAGPGNPGHCLAKVAKALDKSLVLGDLREAYKFLFEDFCDGTVSQGWIAKVSPCLRLSLKWFGTVNTSLIHSVFFLCEWATCDFRDFCTTPPCDIKFTGRKDLSQVHIAVRLLKMKLRDVKSSLRRAKRSIHRASYVAKHESQRHNQNYITTGSSVISESPGPLHDIIVCWIDQHVVHKGEGLKRLHLFVVELIRAGIFYPLAYVRQLIVSGIMDMDVNVVDVERRKRHSHILKQLPGDFMRDALTESGIAEGTQLIEALQTYLTERRLILRNSPSEPRDGANANNAKIPVLKRKRHPASSKDGTSTVSTDQWKTVQSTISSKSAKDGASVEELKETISVLLQLPNSLSNLNSTGCDESEGSVRKPTWPHNGKIEPVEGTPGCEECRRAKRQKLSEERSSFVPGDDDTWWVKKGLKSTEPLKVDQPQKTTKQVTKSRQKNVRKMSLSQLAASRIEGSQGASTSHMCENKVSCPHHRTPVDGDALRSVDSMRTCTSRDIVFIGKALKKLRFVEKRAVAAWLLTVVKQVIEETEKNIGKVGQFGRAYSMVDDRNSIRWKLGEDELSAILYLIDISDDLVSAVKFLLWLMPKVLSSPNSTIHSGRNVLMLPRNVENQVCDVGEAFLLSSLRRYENILVAADLIPEALSFTMRRAATIIASNGRVSNSGAIAFTRYLLKKYSNVASVIEWEKTFKSTCDARLSAELESVRSVDGELGLPFGVPAGVEDPDDFFRQKISGSRLPSRVGAGMRDIVQRNVEEAFQYLFGKDRKLYAAGTPKGHALEKWDNGYQIAQQIVMGLIDSIKQTGGAAQEGDPSLVLSAVSAIVGSVGPTLAKMPDFSSGNNQSSIVSLNYARCILRMHITCLRLLKEALGERQSRVFDIALATEASNVFAGVFAPSKASRAQFQISSAEVHDTSATNSNDVGNNSIKTVVTRATKTAAAVSALVVGAVIYGVTSLERMVTILRLKEGLDVIQCIRTTRSNSNGNARSVGAFKADSSIEVHVHWFRLLVGNCRTLCEGLAVDLLGEPSISALSRMQRMLPLSLIFPPAYSIFAFVRWRPFILNANVAVREDMTQLYQSLTMAIADAIKHSPFRDVCFRDCQGLYDLMAADGSDAEFAALLELNSSDMHLKSMAFVPLRSRLFLNAMIDCKMPPSIFTQDDVKRVSGPGESKIKFANGDSKLPDKLMHVLDTLQPAKFHWQWVALRLILNEQTLIEKLEHDVSLSEAIQLASPSPDKAAAAATEKENNFIQILLTRLLVRPDAAPLFSELVHLFGRSLQDSMLLQAKWFLVGNDVLFGRKTIRQRLHNIAKSEELSAKTQYWEPWGWCSPCTDPVTIKGDKKKFDAASLEEGEVVDEGIDMKRSLKGLSHVSQVFDSESSRINQQHVTERALIELLLPCIDQSSDESRNSFANDIIKQLGQIAEVTGGGKPVGTTPPGVEGQTNKANNTRKGIRGGSPGLARRPVVATDSSPSPAALRVSVSLRLQLLLRFLPILCTGREPSVRNMRNTLVPIILRLLGSRVVHDDAYILSNSVHSKKDLESSSEAASAAFVDFSAEGLFDRLLLVLHALLSSYPASWLRLKPGSKSINESTKEFSGFDRGFLESMQNELDSMQLPDTIRWRIQAAMPVLFPSTQSSFSCQPPPVPTSAVACLQASNTIPGFNSSSSANPPLKNPVLSRVAANASAKSKQQDSELDIDPWTLLEDGAGSCPSASNIASIGGGDHANVRAASWLKGAVRVRRTDLTYVGAVDDDS* 2256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1360 2255 SMART Med12_2 190 251 IPR019035 GO:0003712|GO:0006357|GO:0016592
Mal5g1360 2255 MobiDBLite consensus disorder prediction 7 48 - -
Mal5g1360 2255 MobiDBLite consensus disorder prediction 855 884 - -
Mal5g1360 2255 MobiDBLite consensus disorder prediction 1 48 - -
Mal5g1360 2255 MobiDBLite consensus disorder prediction 777 814 - -
Mal5g1360 2255 Pfam Transcription mediator complex subunit Med12 195 251 IPR019035 GO:0003712|GO:0006357|GO:0016592
Mal5g1360 2255 PANTHER RNA POLYMERASE II TRANSCRIPTION MEDIATORS PROTEIN 64 2255 - -
Mal5g1360 2255 PANTHER RNA POLYMERASE II TRANSCRIPTION MEDIATORS PROTEIN 1 42 - -
Mal5g1360 2255 MobiDBLite consensus disorder prediction 1938 1952 - -
Mal5g1360 2255 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 12 64 2255 - -
Mal5g1360 2255 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 12 1 42 - -
Mal5g1360 2255 MobiDBLite consensus disorder prediction 1928 1973 - -
Mal5g1360 2255 MobiDBLite consensus disorder prediction 925 945 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1360 Mal-Chr5 24348144 24360550 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1360 - - gmx:100781696 3275.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g1360 5 24348144 24360550 Mal5g1360 5 24348144 24360550 ECH