Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1276 ATGGCGACTCTAAGATCAATACTGAAAGCAGCAACAACAACAACAACCCTTCATCGTTCATCTCTTCTAAACCACCTCCGTCACATGAGCAACCTCCCAGAAAACACAGTTTACACAGGTCCGACACCACAAAACAAAAGAGTAACACTTTCACAACTGCGACAAAAACACAAAAACTCACAACCAATCACAATGGTAACTGCTTATGATTACCCTTCTGCTGTTCACCTCGATATGGCCGCCATTGATATCTGTCTTGTTGGTGATTCTGCTTCCATGGTTGTTCATGGTCATGATACTACTTTACCTATTACGTTAGATGAAATGCTTGTTCATTGTCGTGCTGTTGCTCGTGGTGCTAAAACTCCTCTTCTTGTTGGTGATTTGCCTTTTGGAACGTATGAGTGTAGTTCTAATCAGGCAGTGGACGCGGCAGTTCGAATTTTGAAAGAAGGACAAATGGATGCCATAAAGTTGGAAGGAGGTTCACCTTCAAGAATTGTTGCAGCAAAAGCTATTGTTGAAGCTGGAATAGCTGTGATTGGGCACGTTGGCCTTACTCCACAGGCAATTAGTGTTTTAGGTGGATTTAGGCCTCAAGGAAGGAATGTCGCTAGTGCTGTCAAGGTTGTCGAGACAGCATTGGCTTTGCAAGAAGCAGGGTGTTTTGCTGTTGTTTTAGAATGTGTGCCTGCACCGGTGGCTGCGGCAGCAACAGCAGCACTTCAAATTCCTACAATTGGAATTGGGGCTGGACCTTATTGCAGTGGACAGGTGCTTGTTTACCATGATCTTCTTGGTATGTTACAACACCCTCACCATGCAAAGGTGACTCCAAAATTTTGTAAACAGTACGCTCGTGTCGGAGATGTCATCAATAAAGCCTTACTGGATTATAAGGAAGATGTGATGAATGGTTCATTTCCTGATGCTCAACATAGTCCATACAAAATCAGTGAAACTGATGCTGATGGTTTCTTAAATGAGCTACAAAAGTTAGGATTTGACAAGGCAGCGTCTGCGGCATCCGAAGCAGTGCAGAAGATGGGTACGAAATCAACAAAGTGA 1068 0.4363 MATLRSILKAATTTTTLHRSSLLNHLRHMSNLPENTVYTGPTPQNKRVTLSQLRQKHKNSQPITMVTAYDYPSAVHLDMAAIDICLVGDSASMVVHGHDTTLPITLDEMLVHCRAVARGAKTPLLVGDLPFGTYECSSNQAVDAAVRILKEGQMDAIKLEGGSPSRIVAAKAIVEAGIAVIGHVGLTPQAISVLGGFRPQGRNVASAVKVVETALALQEAGCFAVVLECVPAPVAAAATAALQIPTIGIGAGPYCSGQVLVYHDLLGMLQHPHHAKVTPKFCKQYARVGDVINKALLDYKEDVMNGSFPDAQHSPYKISETDADGFLNELQKLGFDKAASAASEAVQKMGTKSTK* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1276 355 CDD KPHMT-like 50 309 IPR003700 GO:0003864|GO:0015940
Mal5g1276 355 Gene3D - 45 326 IPR040442 -
Mal5g1276 355 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 47 313 IPR015813 GO:0003824
Mal5g1276 355 Pfam Ketopantoate hydroxymethyltransferase 47 310 IPR003700 GO:0003864|GO:0015940
Mal5g1276 355 TIGRFAM panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 48 314 IPR003700 GO:0003864|GO:0015940
Mal5g1276 355 Hamap 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 48 315 IPR003700 GO:0003864|GO:0015940
Mal5g1276 355 PANTHER 3-METHYL-2-OXOBUTANOATE HYDROXYMETHYLTRANSFERASE 26 351 - -
Mal5g1276 355 PANTHER 3-METHYL-2-OXOBUTANOATE HYDROXYMETHYLTRANSFERASE 26 351 IPR003700 GO:0003864|GO:0015940
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1276 K00606 - gmx:100808841 550.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g1276 5 22325168 22328057 Mal5g1276 5 22325168 22328057 ECH