Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1232 ATGGCTGGAGAAACAGCATGGATCAGCCACTATGATGTTGAAACAAGAAAGGAGACAAAGGACATTGATTCGTTAGCGGAACCAGGTGAGGAAGTTGACAAAGAAGGGACTGTTATTTCCCTGGACGTTTTGCCTGATGAGTTATTGGAGCGTATGCTAGCCTATCTCCCGGCTGCAAGCATTTTCAGAGCAAGCAGTGTGTGTAAAAGATGGCATGAGATTGTTACTTCTGAAAAGTTTCTATGGAACCCTTCCAATTCGCCACCACAGAAGCCTTGGTACTTTATGTTTACTAGCTGCGATGAACCAACTGGTTGTGCTTATGATCCGAATCTTCGGAAATGGTATTACATTGAACTTCCCTTCATTGGAACTTCTAATTGGTTGGTTTCTTCTTCGTATGGCTTAGTTTGCTTCATGGATAATGACAGCAGAAGCGAATTATGCGTGTGCAATCCTATTACCAGAATCTGCAGGAAGCTTCAGGAGCCTCCAGGATTGGGAGTCTCTGATTATGGTGCATTAGCAATGTCGGTTGACAGGAAGTCCCATGGTTATACCGTGGCAATTGTGAAATCAATACAAGTTCCTGAAAACTTTATCCAGTGGGATATCTCGATTCATATTTACAAATCAGAAGAGGAGACTTGGGCGACACCGCTAACCGAGGTTTTGGTGGGGTGGAGAGGTGGAGATGAGAGTGTGATATGCAATGGTGTGCTGTATTTTCTAGTTTACTCTACTGGAGTTGTTCCACCTGAAAACCGACACGCATTAGTTGCATATAATATCTCCAGCCGATCTTCTCAAACTAGCTTGAGAAGGAGCTTTATTTCGGTACCTTGTTCTCTAACATGTGGCCGTCTAATGAATATGAAGGAGAAGCTTGTAATGGTGGGAGGGATTGGCAAAAATGATCGAACAGACATAATCAAAGGAATCGGTATCTGGGTTCTTCGTGATAAGAAGTGGGAAGAGATTTCCCGAATGCCGCACAAATACTTCCAAGGCTTTGGAGAGTTTGATGAGGTTTTCGCTAGCAGTGGCATAGATGATCTAATATATATTCAAAGTTATGGATCTCCTGCACTTCTCACATTTGACATGAAAGTTAAACAATGGAAATGGTCGCAGAAATGCCCGGTAACAAAGAGGTTCCCTCTACAGCTTTTCTCTGGTTTTTGCTTTGAGCCTAGGCTTAAAATTGCTCCATAG 1215 0.4296 MAGETAWISHYDVETRKETKDIDSLAEPGEEVDKEGTVISLDVLPDELLERMLAYLPAASIFRASSVCKRWHEIVTSEKFLWNPSNSPPQKPWYFMFTSCDEPTGCAYDPNLRKWYYIELPFIGTSNWLVSSSYGLVCFMDNDSRSELCVCNPITRICRKLQEPPGLGVSDYGALAMSVDRKSHGYTVAIVKSIQVPENFIQWDISIHIYKSEEETWATPLTEVLVGWRGGDESVICNGVLYFLVYSTGVVPPENRHALVAYNISSRSSQTSLRRSFISVPCSLTCGRLMNMKEKLVMVGGIGKNDRTDIIKGIGIWVLRDKKWEEISRMPHKYFQGFGEFDEVFASSGIDDLIYIQSYGSPALLTFDMKVKQWKWSQKCPVTKRFPLQLFSGFCFEPRLKIAP* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1232 404 PANTHER OS02G0260200 PROTEIN 1 403 - -
Mal5g1232 404 SUPERFAMILY F-box domain 41 142 IPR036047 GO:0005515
Mal5g1232 404 SUPERFAMILY Galactose oxidase, central domain 105 382 IPR011043 -
Mal5g1232 404 Pfam F-box-like 43 83 IPR001810 GO:0005515
Mal5g1232 404 TIGRFAM F_box_assoc_1: F-box protein interaction domain 134 335 IPR017451 -
Mal5g1232 404 Gene3D - 35 84 - -
Mal5g1232 404 ProSiteProfiles F-box domain profile. 38 85 IPR001810 GO:0005515
Mal5g1232 404 PANTHER F-BOX FAMILY PROTEIN 1 403 IPR045048 -
Mal5g1232 404 SMART fbox_2 44 84 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1232 Mal-Chr5 21764731 21765945 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1232 - - gmx:100817678 640.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g1232 5 21764731 21765945 Mal5g1232 5 21764731 21765945 ECH