Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1204 ATGTCTTCTTCTCCTCTTCTTCCTCTATGCATATTCCTTTCCCTTCTCATCGTCTTCGCCGGAACACCTTCTCCGGCACGTGCCTCCGATGAGTTGGAACGTGGTGGTGGTGGAGGAGGAGGAAAGCAGAGAGAATTTGACTATTTTGCTTTGGCGTTACAATGGCCTGGTACTTATTGTCAACGCACGCGCCATTGTTGTTCTTCTAATGCTTGCTGCAGAGGCGCCAATTCTCCGGCAATATTCACCATACATGGACTCTGGCCGGACTATAATGATGGAACGTGGCCAGCCTGTTGCACTAAATCTCGTTTTGATCCAAAAGAGATATCAACATTGAATAATGCTTTAGAGCAATATTGGCCATCATTGAGCTGTGGCTCACCATCATCATGCAGTGGTGGAAAAGGTTCATTTTGGGGTCATGAGTGGGAGAAGCACGGCACATGCTCATATCCTGTGGTTGGAAATGAATATGATTATTTTGTGACAACACTGAATGTTTATTTCAAATATAATGTTACCAAAGTTCTAAATGAGGCTGGATATGTTCCGTCAAACACAGAAAAGTATCCCCTCGGAGGCATTATCTCTGCCATTGAGAATGCTTTCCATTTATCTCCTCAAATAATTTGCTCAAAAGGTTCTATAGAGGAACTTCGTCTATGCTTCTATAAGGACTTCAAGCCACGTGATTGTGCTATTGGAGCAGATGCTAAAATTGACATGGTTACTTCAAAAGGATCATGTCCTAAATATGTTAGCTTGCCAGAAACTGTATCAAGAGGGCATAATGGACTTAAGAGTTGGGCGTCAAATGATGCAGCTCTTTAA 834 0.4293 MSSSPLLPLCIFLSLLIVFAGTPSPARASDELERGGGGGGGKQREFDYFALALQWPGTYCQRTRHCCSSNACCRGANSPAIFTIHGLWPDYNDGTWPACCTKSRFDPKEISTLNNALEQYWPSLSCGSPSSCSGGKGSFWGHEWEKHGTCSYPVVGNEYDYFVTTLNVYFKYNVTKVLNEAGYVPSNTEKYPLGGIISAIENAFHLSPQIICSKGSIEELRLCFYKDFKPRDCAIGADAKIDMVTSKGSCPKYVSLPETVSRGHNGLKSWASNDAAL* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1204 277 SUPERFAMILY Ribonuclease Rh-like 45 257 IPR036430 GO:0003723|GO:0033897
Mal5g1204 277 Pfam Ribonuclease T2 family 46 233 IPR001568 GO:0003723|GO:0033897
Mal5g1204 277 ProSitePatterns Ribonuclease T2 family histidine active site 1. 82 89 IPR018188 GO:0003723|GO:0033897
Mal5g1204 277 PANTHER RIBONUCLEASE 2-LIKE ISOFORM X1 41 264 - -
Mal5g1204 277 CDD RNase_T2_euk 46 233 IPR033697 -
Mal5g1204 277 Gene3D - 42 261 IPR036430 GO:0003723|GO:0033897
Mal5g1204 277 ProSitePatterns Ribonuclease T2 family histidine active site 2. 139 150 IPR033130 -
Mal5g1204 277 PANTHER RIBONUCLEASE T2 41 264 IPR001568 GO:0003723|GO:0033897
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1204 Mal-Chr5 21446305 21451685 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1204 K01166 - gmx:100789614 427.172