Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1190 ATGGCTTCGGAAGATGTGAAGAGTGGAGAATCAGCGGTGACGAAGATCGTGAATTTGGCGGAAGAAGCGAAGCACGCTAGAGAAGGTGTTGTTAAAGCGAAGCCTAACTATGCTATTGGTAGCATCTGCAAATCTCTCGTCGCCGGTGGTGTCGCTGGAGGAGTATCACGAACGGCAGTTGCTCCGCTCGAGCGAATGAAAATTTTGCTTCAGGTCCAGAATCCTCATAACATAAAATACAGTGGAACAATACAAGGCCTGAAATATATATGGAGAACTGAAGGATTCCGTGGACTGTTCAAGGGAAATGGTACTAATTGTGCTAGAATTGTCCCAAATTCTGCTGTGAAGTTCTTCAGTTATGAGCAAGCTTCTAAAGGCATACTGCATTTGTATAAGCAGCAAACTGGAAATGAGGATGCTCAGCTGACTCCTGTTTTACGTCTTGGAGCTGGTGCATGTGCTGGAATAATTGCTATGTCTGCAACTTATCCGATGGATATGGTCCGAGGCAGGATAACCGTTCAGACTGAGAAATCCCCTTATCAGTACAGAGGGATGTTCCATGCTTTGAGTACTGTGCTCAGGGAAGAAGGACCACGTGCTTTATATAAGGGCTGGCTTCCTTCAGTAATTGGAGTTATTCCTTATGTAGGTCTCAACTTTGCTGTCTATGAGTCTCTGAAAGATTATTTGATTAAATCTAAACCATTTGGTCTAGCCCAAGATTCTGAGCTGAGTGTGACAACACGCCTTGCTTGTGGTGCTGCTGCCGGAACCATTGGACAAACTGTTGCTTATCCTCTTGATGTCATTCGTCGACGAATGCAGATGACTGGTTGGCACAATGCTGCTTCTGTTATAACTGGGGATGGAGTGGGCAAAGTCCCACTTGAATATACTGGAATGATTGATGCATTTAGGAAAACTGTTCGCCATGAGGGATTCGGTGCATTATACAAGGGTCTGGTGCCCAATTCCGTTAAGGTGGTCCCATCCATAGCACTTGCGTTTGTATCATATGAGATGGTGAAGGACATTTTAGGAGTGGAGATCAGAATATCAGACTAA 1071 0.4482 MASEDVKSGESAVTKIVNLAEEAKHAREGVVKAKPNYAIGSICKSLVAGGVAGGVSRTAVAPLERMKILLQVQNPHNIKYSGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILHLYKQQTGNEDAQLTPVLRLGAGACAGIIAMSATYPMDMVRGRITVQTEKSPYQYRGMFHALSTVLREEGPRALYKGWLPSVIGVIPYVGLNFAVYESLKDYLIKSKPFGLAQDSELSVTTRLACGAAAGTIGQTVAYPLDVIRRRMQMTGWHNAASVITGDGVGKVPLEYTGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSIALAFVSYEMVKDILGVEIRISD* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1190 356 PRINTS Mitochondrial carrier protein signature 102 122 IPR002067 GO:0055085
Mal5g1190 356 PRINTS Mitochondrial carrier protein signature 204 222 IPR002067 GO:0055085
Mal5g1190 356 PRINTS Mitochondrial carrier protein signature 255 277 IPR002067 GO:0055085
Mal5g1190 356 PRINTS Mitochondrial carrier protein signature 158 176 IPR002067 GO:0055085
Mal5g1190 356 PRINTS Mitochondrial carrier protein signature 45 58 IPR002067 GO:0055085
Mal5g1190 356 PRINTS Mitochondrial carrier protein signature 58 72 IPR002067 GO:0055085
Mal5g1190 356 PANTHER SOLUTE CARRIER FAMILY 25 1 351 - -
Mal5g1190 356 Gene3D Mitochondrial carrier domain 39 350 IPR023395 -
Mal5g1190 356 ProSiteProfiles Solute carrier (Solcar) repeat profile. 246 347 IPR018108 -
Mal5g1190 356 ProSiteProfiles Solute carrier (Solcar) repeat profile. 143 231 IPR018108 -
Mal5g1190 356 ProSiteProfiles Solute carrier (Solcar) repeat profile. 40 127 IPR018108 -
Mal5g1190 356 PANTHER BNAA09G39370D PROTEIN 1 351 - -
Mal5g1190 356 SUPERFAMILY Mitochondrial carrier 42 343 IPR023395 -
Mal5g1190 356 Pfam Mitochondrial carrier protein 42 127 IPR018108 -
Mal5g1190 356 Pfam Mitochondrial carrier protein 245 348 IPR018108 -
Mal5g1190 356 Pfam Mitochondrial carrier protein 143 235 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1190 Mal-Chr5 21258588 21264483 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1190 46 351 EF-hand Containing Proteins AT5G51050 38.436 2.76e-66 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1190 K14684 - gmx:100814032 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g1190 5 21258588 21264483 Mal5g1190 5 21258588 21264483 ECH