Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1140 ATGGCCCCAAGATACAGTCGTGGAAAGGCCAAAGGAGAGAAGAAGAAGAAGGAGGAGAAGGTTCTTCCTGTTGTCATGGATATCACAGTGAACCTTCCAGATGAAACTAGTGTTGTTCTCAAGGGGATATCAACGGATAGAATAATAGATGTTCGTCGGCTCTTATCGGTGAATACGGAGACGTGTTACATCACCAACTTTTCCCTATCACATGAGATAAGAGGAGTACGTTTGAAGGACACGGTGGACGTGTCCGCACTGAAACCATGCCTCCTCACTTTAGTTGAAGAGGAATACGATTCCGATGGAGCGGTGGCACACGTGCGAAGACTTCTTGACATCGTTGCCTGCACCACCAGTTTCGGTCCGTCGTCTCCACCGAAGAATGCGGCGGCGAAGTCGACTAAATCTCAACCGTCTCCGGCGAAACAATCACCGAAAGATGCTGCGGCGGTGGACGCAGACGGAGAGATAAGCCACTCGTGTCCTAAGCTCGACAGTTTCTACGAGTTCTTCTCTCTCTCACATCTCACTGCTCCTCTTCAATATGTGAAGAAAGCTTCGAAGAGAAACGTGGAGGAGATATTGGAAGAGGAACATCTCTTTTCGCTTGATGTGAAGGTTTGTAACGGGAAAGTGGTGCACGTTGAGGCTTGCAGAAAGGGGTTTTACAGTGTTGGGAAGCAGAGGATTCTGTGTCATAATCTCGTTGATTTGTTGAGACAGATTAGCAGAGCTTTTGACAATGCTTATGATGATCTTTTGAAGGCATTTTCAGAACGTAACAAGTTTGGAAATCTCCCCTATGGCTTCAGATCCAACACTTGGCTTGTTCCTCCCATTGCAGCACAATCACCATCATTTTTTCCTCCTCTTCCCGTGGAGGATGAAAATTGGGGAGGAAATGGTGGTGGTCTCGGAAGGGACGGAGAGTATGATATGATTCCTTGGGCCAATAAGTTTTCTTTTATTGCATCTATGCCCTGCAAGACAGCAGAAGAAAGGCAAGGCCGTGATAGAAAAGCATTTCTTCTGCACAGCCTGTTTGTTGACGTTGCCATTTTCAGAGCAATTAGGGCTGTTAAACATGTTTTGGAAGATCCCAGTTTTAACTGCTCAGCAGCAGAAAATGATATTTACAGTGAGAAAGTAGGTGATTTGAGCGTTAGAGTCTTGAAAGATGGTTCTGTCGCAAGCTGTAAGATTGACTCCAAAATTGATGGAGTTGAAGCTACAGGAGTAAATCAAAAGGATCTAGTCGAACGGAATTTACTGAAAGGGATCACTGCAGATGAAAATACTGCTGCCCATGATATTACCACTTTAGGTGTTGTTTATGTAAGATATTGTGGTTATGTGGTTGTTGTGAAAGTTGAAGGTGGAGCTAATGAAAAAGCCAATTCTTCATTTCATCAAAATAATGAATTGTTTGATCAGCCAGAGGGTGGAGCCAACGCACTAAATATTAACAGTTTAAGATTTCGTCTTCACGGCACAGCCCTACCAGAGAACAATAAACAGTTGACTGAGATACAAATGTTTGAGAGTGAAGAGCTTGGTGGTACCAATGCTTTTGTGGAAAAGCTGATTAAAGAAAGCCTTGCTAAGCTTGAGGAAGAGGAACTAAGTTCGGACTATTTTGTAAGATGGGAACTAGGTGCGTGCTGGGTACAACATTTGCAAGACCAAAACAGTACAGAAAAAGATAAGAAACCTTCTTTGGAGAAGGCTAACAATGAAATGAAGGTTGAGGGTCTAGGGAAACCCCTCAAAGCCCTCAAGAATAATAAAAAGAAATCTGATTCAACCAATCCTAATTGTGCATCTGAACATTCAAAATCTAATCTCGAGGCTGAAAATGCTGCATTGTCTTCAAGTGAATCCCAGCTTGAAACTGCAGCAGCTGAGAATGAGCTTGTGCTGAAACGGATGTTATCTGAGGCAGCTTTTACCCGATTGAAAGAATCAGGAACTGGACTTCACTGCAAGTCTATGCAAGATTTGATCGACTTGTCTCAGAAATACTACACGGATGTTGCTATCCCAAAACTGGTAGCAGATTTTGGCTCATTGGAACTCTCTCCAGTTGATGGCCGCACACTAACTGATTTTATGCATACTAGGGGTCTACGAATGCGATCTCTTGGACATGTTGTCAAGCTTTCTGAAAAACTTTCACATGTGCAATCACTTTGCATTCATGAGATGATAGTTCGGGCTTTCAAGCACATCCTGAGGGCAGTGATTTCTTCTGCTGTTGACAAGGAGAAAATGGCTTCATCAATAGCTGGTGCATTGAATTTGCTGCTTGGTGTTCCTGAAAATAGAGAATCAGATAAATCATGTGATGTCAACCCTCTTGTGTGGAAATGGCTAGAGTTGTTTTTGAAGAAACGATTTGACTGGGATCTTAGCAGGTTGAACTATAAAGATGTGAGGAAATTTGCAATTCTACGCGGCTTGTGTCACAAGGTGGGAATTGAGCTCGTTCCAAGGGACTTTGACATGGATTCTCCATTTCCCTTCCAAAAATCTGATATTGTCAGCTTGGTTGCAGTTCACAAGCAAGCAGCATGCTCATCTGCAGATGGAAGGCAGCTCTTGGAGTCCTCCAAAACAGCTTTAGACAAGGGAAAGCTTGAAGATGCTGTTACCTATGGGACAAAGGCTCTTGCGAAGCTTGTAGCAGTTTGTGGTCCCTACCATCGGATGACAGCAGGAGCATACAGTCTCCTTGCTGTAGTTTTATATCATACTGGAGACTTTAATCAGGCTACAATCTATCAACAAAAAGCTTTGGATATCAATGAGAGAGAGTTAGGTCTGGATCATCCCGATACCATGAAGAGCTATGGGGATCTTGCTGTTTTCTATTACAGACTTCAACACACTGAGCTGGCTCTTAAATATGTGAAGCGTGCTTTATACCTTTTGCATCTGACATGTGGCCCATCTCATCCAAATACTGCCGCAACTTACATTAATGTGGCTATGATGGAGGAAGGTCTGGGAAATGTACACATTGCTCTCAGATATCTTCACAAAGCATTAAAGTGCAACCAAAAATTACTTGGTGCAGATCATATTCAGACAGCTGCAAGTTACCATGCAATAGCAATAGCACTCTCGTTGATGGAAGCATATCCGTTGAGTGTGCAGCATGAGCAAACAACTTTGCAAATTCTGCGGGCAAAGCTTGGCCCCGATGACTTGCGAACACAGGACGCTGCAGCTTGGCTTGAGTATTTTGAGTCCAAGGCTTTTGAACAGCAAGAAGCTGCTCGAAATGGTACGAGAAAACCTGATGCATCAATAGCTAGCAAAGGCCATCTAAGTGTGTCGGATCTTCTTGACTACATTAATCCTAATCACGATGCCAAAGGGAGGGATGCAGCAGCAAAGAGAAGAAACCAGGTGAGAGCAATATCCTACCAGAACAATGTCTCAGTAAGTTCTGATGAGTCTTCGAAAGAAATTCAAAAAGAGGCTTCAGATGAAGAGCTACATATACCTGAACCAGGAAGTAGTGCAGATTCTGAGAATGAGAGCAACTCGGCACCTGAACCAGAACCAGAACAGCCAATTTTAGAAAAGATCTCAGATGAAAAGCCACAACCTTCTAATGAATTATTGTCTGAAGCACATCCAGATGGAGATGATGGATGGCAATCAGTTCAAAGACCAAGATCAGCTGGTTCATATGGCCGGAGACTGAAACAAAGACGGGCAACACATGGCAAAGTTTATAGTTACCAGAAGAATGCGGAAGTTGGCACTGAACATTCTTCGGTAAAGAGTGCTAATCAGAATAGCAAGTATTATTTCTTGAAGAAGCGGGCAATACACCATGGGGGTCATGCGGATAATCGTGCTGTAAACATCAGCCAAGGCGCTAAATTCGGTAGGAAAGCAGTCAAGGCTGTTGCATACAGGGTCAAGTCTACACCATCTGCTGCTAAGACTGTTGCAAATGAGACATTAGAAATTGTTAGTGAGAAAGAAGTTGATTCAATTGATGTTAATCCTGTTAAGACTTCTATAGTTAGCCTTGGTAAAAGTCCTTCATACAAGGAAGTAGCCTTGGCTCCTCCTGGGACAATCTCCAAGTTGCAGGTCTATAATCCTCAAAATGAGATTTCTGTTAGTCATGAACATGATGTTGGAAAACACAAAGAGGAAGATACTGAAGCTCATAGAAACATCAATCCAACCCCTAAAGAGGCAAATAACGTGTTTAAAGAGAAGTCTGATGATTCTTTGTCTGATTCTATAGAAGATTCACAAGATGATACTGTTGTTTCTACTGAGAAGAAAGAAGAAACTCAATTGAACAAAGTTGTGCAAGATAATTGTGCGACTGTTGAGGGGCTTGAATCTGGGGACCTTGAAGCACAAGGAGCTGTTGATAACAGCATAGTGATTGATGCAGTAGAGGATTCTGTGGACTCTTACAAACAAGAACTTGTGGTTGCAAGAGATTTGCCTTGCAGTTTTGAACCTTCTGATAATACAAATTCTAGTCCACACGGTAGTGAGGATTTAGGGGTCAATTTATTATCACCTGGTCAGAGCCAAGCTGGGGGCATCTCATATAAGAAATTGTCTGCATCAGCAGCTCCATTCAACCCATCACCTGCCATTGCACGTGCTGCACCTATTGCGATGAATATGACTCATCCTTCTGGTCCCGTTCCTGTTCCAGCTATTGGCCCCTGGCCAGTAAACATGAATGTTCACCCTGGACCTGCTACTGTGCTACCTGCTGTTAACCCGATGTGTTCCTCTCCACACCATGCATATCCATCACCTCCAACAACACCAAACATGCTACAACCATTGCCATTCTTGTATCCTCCATATACTCAACCTCAATCAGTACAAACCAGCAGTGGTTTTCATGCCAATCATTTTACATGGCAATGTAATTTGAACCCCGTCATATCTAAGTTTGGTCCTGGTGCTGTTTGGACTGGTTGTCATCCTGTTGAATTTTCTCGTCCAGTACCTATTGTTGAACCAATCCCTGATATCATTTCAGAGCCTCAAGTGCAGTTTCATACAGTTGAAAGTCCAAGTTCAGCTTCAGTTCTGCCTGATGACATTGATAAGGTTGGGGATTTGATTAAAGAGGTAAAAACTTCAGCATCAGAGATGAGTGAAGATGAAACGGTGAGAGTTGGTTCAGAAAGTATAAAAGAAAATGGTAATTCAAATCTTCCTGGGACCGAGAGTCCTGGGAACGAGCCAAATCAAATTGTTGCCTCGAACAGCAGCACTAGCAGTAATGAAATGAACATGGATGATGAGAAAACATTCAGCATTTTGATTCGGGGAAGAAGAAACCGAAAGCAAACTCTGAGAATGCCAATAAGTTTGCTTACTCGACCCCATAGCTCTCAGTCATTTAAGGTTATCTATAACCGTGTAGTGAGAGGAAATGATTCTCCCAGGTCCATCAATTTCTCTTCTAGTAAACATTGTACAGCTACTGCTTAA 5496 0.4292 MAPRYSRGKAKGEKKKKEEKVLPVVMDITVNLPDETSVVLKGISTDRIIDVRRLLSVNTETCYITNFSLSHEIRGVRLKDTVDVSALKPCLLTLVEEEYDSDGAVAHVRRLLDIVACTTSFGPSSPPKNAAAKSTKSQPSPAKQSPKDAAAVDADGEISHSCPKLDSFYEFFSLSHLTAPLQYVKKASKRNVEEILEEEHLFSLDVKVCNGKVVHVEACRKGFYSVGKQRILCHNLVDLLRQISRAFDNAYDDLLKAFSERNKFGNLPYGFRSNTWLVPPIAAQSPSFFPPLPVEDENWGGNGGGLGRDGEYDMIPWANKFSFIASMPCKTAEERQGRDRKAFLLHSLFVDVAIFRAIRAVKHVLEDPSFNCSAAENDIYSEKVGDLSVRVLKDGSVASCKIDSKIDGVEATGVNQKDLVERNLLKGITADENTAAHDITTLGVVYVRYCGYVVVVKVEGGANEKANSSFHQNNELFDQPEGGANALNINSLRFRLHGTALPENNKQLTEIQMFESEELGGTNAFVEKLIKESLAKLEEEELSSDYFVRWELGACWVQHLQDQNSTEKDKKPSLEKANNEMKVEGLGKPLKALKNNKKKSDSTNPNCASEHSKSNLEAENAALSSSESQLETAAAENELVLKRMLSEAAFTRLKESGTGLHCKSMQDLIDLSQKYYTDVAIPKLVADFGSLELSPVDGRTLTDFMHTRGLRMRSLGHVVKLSEKLSHVQSLCIHEMIVRAFKHILRAVISSAVDKEKMASSIAGALNLLLGVPENRESDKSCDVNPLVWKWLELFLKKRFDWDLSRLNYKDVRKFAILRGLCHKVGIELVPRDFDMDSPFPFQKSDIVSLVAVHKQAACSSADGRQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHIALRYLHKALKCNQKLLGADHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEYFESKAFEQQEAARNGTRKPDASIASKGHLSVSDLLDYINPNHDAKGRDAAAKRRNQVRAISYQNNVSVSSDESSKEIQKEASDEELHIPEPGSSADSENESNSAPEPEPEQPILEKISDEKPQPSNELLSEAHPDGDDGWQSVQRPRSAGSYGRRLKQRRATHGKVYSYQKNAEVGTEHSSVKSANQNSKYYFLKKRAIHHGGHADNRAVNISQGAKFGRKAVKAVAYRVKSTPSAAKTVANETLEIVSEKEVDSIDVNPVKTSIVSLGKSPSYKEVALAPPGTISKLQVYNPQNEISVSHEHDVGKHKEEDTEAHRNINPTPKEANNVFKEKSDDSLSDSIEDSQDDTVVSTEKKEETQLNKVVQDNCATVEGLESGDLEAQGAVDNSIVIDAVEDSVDSYKQELVVARDLPCSFEPSDNTNSSPHGSEDLGVNLLSPGQSQAGGISYKKLSASAAPFNPSPAIARAAPIAMNMTHPSGPVPVPAIGPWPVNMNVHPGPATVLPAVNPMCSSPHHAYPSPPTTPNMLQPLPFLYPPYTQPQSVQTSSGFHANHFTWQCNLNPVISKFGPGAVWTGCHPVEFSRPVPIVEPIPDIISEPQVQFHTVESPSSASVLPDDIDKVGDLIKEVKTSASEMSEDETVRVGSESIKENGNSNLPGTESPGNEPNQIVASNSSTSSNEMNMDDEKTFSILIRGRRNRKQTLRMPISLLTRPHSSQSFKVIYNRVVRGNDSPRSINFSSSKHCTATA* 1832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1140 1831 MobiDBLite consensus disorder prediction 562 629 - -
Mal5g1140 1831 Pfam Tetratricopeptide repeat 905 975 - -
Mal5g1140 1831 Pfam Tetratricopeptide repeat 989 1063 - -
Mal5g1140 1831 SMART tpr_5 948 981 IPR019734 GO:0005515
Mal5g1140 1831 SMART tpr_5 906 939 IPR019734 GO:0005515
Mal5g1140 1831 SMART tpr_5 990 1023 IPR019734 GO:0005515
Mal5g1140 1831 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 1813 - -
Mal5g1140 1831 MobiDBLite consensus disorder prediction 1383 1437 - -
Mal5g1140 1831 MobiDBLite consensus disorder prediction 122 150 - -
Mal5g1140 1831 Pfam Mitochondrial function, CLU-N-term 45 115 IPR028275 -
Mal5g1140 1831 SUPERFAMILY Hypothetical protein c14orf129, hspc210 191 263 IPR023231 -
Mal5g1140 1831 SUPERFAMILY TPR-like 943 1070 IPR011990 GO:0005515
Mal5g1140 1831 MobiDBLite consensus disorder prediction 563 582 - -
Mal5g1140 1831 Pfam Translation initiation factor eIF3 subunit 135 693 835 IPR033646 -
Mal5g1140 1831 Gene3D Tetratricopeptide repeat domain 865 978 IPR011990 GO:0005515
Mal5g1140 1831 Gene3D Tetratricopeptide repeat domain 979 1141 IPR011990 GO:0005515
Mal5g1140 1831 Coils Coil 616 636 - -
Mal5g1140 1831 MobiDBLite consensus disorder prediction 122 144 - -
Mal5g1140 1831 ProSiteProfiles Clueless (Clu) domain profile. 295 571 IPR025697 -
Mal5g1140 1831 MobiDBLite consensus disorder prediction 1729 1767 - -
Mal5g1140 1831 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 1 1813 IPR027523 GO:0006996
Mal5g1140 1831 SUPERFAMILY TPR-like 872 977 IPR011990 GO:0005515
Mal5g1140 1831 MobiDBLite consensus disorder prediction 1383 1401 - -
Mal5g1140 1831 MobiDBLite consensus disorder prediction 599 629 - -
Mal5g1140 1831 ProSiteProfiles TPR repeat profile. 906 939 IPR019734 GO:0005515
Mal5g1140 1831 MobiDBLite consensus disorder prediction 1143 1247 - -
Mal5g1140 1831 MobiDBLite consensus disorder prediction 1713 1728 - -
Mal5g1140 1831 MobiDBLite consensus disorder prediction 1155 1173 - -
Mal5g1140 1831 MobiDBLite consensus disorder prediction 1713 1767 - -
Mal5g1140 1831 CDD CLU-central 695 836 IPR033646 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1140 Mal-Chr5 20293442 20307504 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1140 K03255 - gmx:100784117 2753.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g1140 5 20293442 20307504 Mal5g1140 5 20293442 20307504 ECH