Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1101 ATGACAGAGTTAACAGTGAAAACCCCACCTCAAATGCAATCACTTGGTGTTTTCCTCCGTGAACCACCGCAGAATGAGGCCACCGACGATGATAACAACCGGAATCAATCACCGGCGATGAGGAAAACCATTAAGAAAACAATAATCATTGATGAATCTTCCTTAGAGAATCCTGATTTGGGTCCATTTCTTCTGAAGATGGCAAGAGATACAATAGCTTCTAGTGAGAATCCAGAAAAGGCTTTGGATTATGCAATCCGGGCATCCAAATGTTTTGAACGGGTTTCGGGTCCGGGTTTGGATCTTGCCACGTGTCTACATGTTGTTGCTGCAATTTATTGTAGTTTGGGAAAGTTGGATGAGGCTATTGAGGAATTGGAAAGGTCTATTTTGTTGTTGGATGTTGAAAACGGGTCGGGTCATGCTATGGTGAAGTTTTCTGGGTATATGCAACTTGGTGATACTTATTCTATGACTGGATTGTTGGATAGATCCATTTTGTGTTATGAGTTGGGTTTGAAGATTCAAATGGATATTTTGGGTAAGTCTGACCCGAGAGTTGCTGAGACTTGCAGGTACTTAGCTGAAGCCCATGTTCAAGCCATGCAATTCGATGATGCAGAGCACTTCTGCAAGAAGACACTAGAAATTCATAGCGAGCATTGCTCACCCGCTTCCCTTGCCGAAGCAGCCGACCGGCGTCTCATGGCCCTTATATGCGAAGCAAAGGGAGATTATGAACCAGCACTCGAGCACCTTGTCCTAGCAAGCATGTCAATGATTGCTAACGGACAAGATAACGAGGTTGCGGCTATTGATGTTAGCATCGGAGATATTTACACGTCCTTGTGTCGTTTTGACGAGGCCATTTTCGCCTATCAGAAAGCACTGACAGTGTTCAAATCCACCAAGGGTGAAAATCACAGTTCTGTTGCGTTAGTCTACATCCGACTCGCTGATCTTTACTACAAGACTGGAAAATTACGCGAGTCAACGTCCTATTGCGAAAATGCGTTAAGAATATACAGCAAACCTGTGCCTGGAATAACCGCCGGAGAGATTGCGAGCGGATTGACCGAAATCTCGGCAATCTACGAAGCTCTAAACAAGCCGGAGGAAGCGTTGAAGCTTTTGCAGAAGGCGGTGAAATTATTGGAGGGTATCCCTGGACAATATAGGACAGTGGCAGGAATAGAAGCTCAAATGGGAGTGTTGTTCTACATTGTCGGACGGCATGTGGATGCTTGGAAATCTTTTGATAATGCTGTCACCAAGCTGAGAACCGGCGGGGAGAGGAAATCTGCCTTTTTTGGATTTGTGTTAAACCAGATGGGCTTGGCATGTGTTCAACTGTATAAAATTGAAGAGGCTGCCACACATTTTGAAGAAGCTAGGGAGATATTGGAAAGGGAATGTGGAACCTATCATTTGGACACTCTTGGTGTGTATAGCAACCTAGCTGCAACTTATGATGCCTTGGGAAGTGTGTGTAGCAGGAATTCCCCTGGTGGTAGAAGAAGCAGAAGAAATAGCTTGGAATCATCTTGTACTATTGGAGGAAGGAGGTTGAAGAAGAAGCAGAAGCTAAAAGCCACTAGTCAGAAACCATTCAAGCTAAGAACTGAGCAACGGGGAAAGATGAATGACGAACAATTGATGAAGAAGGTGAAAGAGATTTTGACAGAAGAAGAGAAGATGAGAATACCTATTGCACAAGGACTTCCATGGACAATTGATGAACCTGAGGTAAGGTCACTTTCTCATGTTAATCCTTAG 1776 0.442 MTELTVKTPPQMQSLGVFLREPPQNEATDDDNNRNQSPAMRKTIKKTIIIDESSLENPDLGPFLLKMARDTIASSENPEKALDYAIRASKCFERVSGPGLDLATCLHVVAAIYCSLGKLDEAIEELERSILLLDVENGSGHAMVKFSGYMQLGDTYSMTGLLDRSILCYELGLKIQMDILGKSDPRVAETCRYLAEAHVQAMQFDDAEHFCKKTLEIHSEHCSPASLAEAADRRLMALICEAKGDYEPALEHLVLASMSMIANGQDNEVAAIDVSIGDIYTSLCRFDEAIFAYQKALTVFKSTKGENHSSVALVYIRLADLYYKTGKLRESTSYCENALRIYSKPVPGITAGEIASGLTEISAIYEALNKPEEALKLLQKAVKLLEGIPGQYRTVAGIEAQMGVLFYIVGRHVDAWKSFDNAVTKLRTGGERKSAFFGFVLNQMGLACVQLYKIEEAATHFEEAREILERECGTYHLDTLGVYSNLAATYDALGSVCSRNSPGGRRSRRNSLESSCTIGGRRLKKKQKLKATSQKPFKLRTEQRGKMNDEQLMKKVKEILTEEEKMRIPIAQGLPWTIDEPEVRSLSHVNP* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1101 591 SUPERFAMILY TPR-like 87 175 IPR011990 GO:0005515
Mal5g1101 591 Gene3D Tetratricopeptide repeat domain 433 496 IPR011990 GO:0005515
Mal5g1101 591 Gene3D Tetratricopeptide repeat domain 141 255 IPR011990 GO:0005515
Mal5g1101 591 MobiDBLite consensus disorder prediction 20 41 - -
Mal5g1101 591 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 26 549 - -
Mal5g1101 591 Gene3D Tetratricopeptide repeat domain 34 140 IPR011990 GO:0005515
Mal5g1101 591 MobiDBLite consensus disorder prediction 529 550 - -
Mal5g1101 591 Pfam Tetratricopeptide repeat 269 343 - -
Mal5g1101 591 ProSiteProfiles TPR repeat profile. 270 303 IPR019734 GO:0005515
Mal5g1101 591 PANTHER KINESIN LIGHT CHAIN-LIKE PROTEIN 26 549 - -
Mal5g1101 591 MobiDBLite consensus disorder prediction 535 550 - -
Mal5g1101 591 Pfam MalT-like TPR region 106 254 IPR041617 -
Mal5g1101 591 SUPERFAMILY TPR-like 108 466 IPR011990 GO:0005515
Mal5g1101 591 Coils Coil 116 136 - -
Mal5g1101 591 SUPERFAMILY TPR-like 235 343 IPR011990 GO:0005515
Mal5g1101 591 Gene3D Tetratricopeptide repeat domain 256 432 IPR011990 GO:0005515
Mal5g1101 591 SMART tpr_5 438 471 IPR019734 GO:0005515
Mal5g1101 591 SMART tpr_5 312 345 IPR019734 GO:0005515
Mal5g1101 591 SMART tpr_5 146 179 IPR019734 GO:0005515
Mal5g1101 591 SMART tpr_5 103 136 IPR019734 GO:0005515
Mal5g1101 591 SMART tpr_5 355 388 IPR019734 GO:0005515
Mal5g1101 591 SMART tpr_5 270 303 IPR019734 GO:0005515
Mal5g1101 591 SMART tpr_5 188 221 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1101 Mal-Chr5 19522466 19530043 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1101 - - gmx:100794697 783.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g1101 5 19522466 19530043 Mal5g1101 5 19522466 19530043 ECH