Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1098 ATGGCCAACTTAGTTACCTTGTTTTTCCTATGGTTGAGTTTCATATGCACTATCTACAATGTGAAACTTATGGCACATGGAAGTGCAATGGGAGAATCAACAAGGTTCTATGATTTTAAGGTTCAAACTAAAAGAGTTACCAAACTTTGCAACTCCAAAGACATTGTCACAGTCAATGGTATGTATCCAGGACCTGTTGTTTACGCGCAAGAAGACGATAGAATCATAGTCAAGGTTACCAATAAGACACCTTTCAATGTTACAATTCACTGGCATGGTATCCGGCAACGGCTATCATGCTGGTATGATGGACCGTCCTTTATTACACAATGTCCAATTCAAGCAGGCCAGAGTTTCACCTATAACTTTACAGTGGTGAATCAGAAGGGCACTTTCTTCTGGCATGCTCATGTTTCTTGGCTAAGAGGAACGGTTCATGGAGCTATGATTGTTTATCCAAAGAATAGGATACCTCTCCCATTTAAGGTTCCTTATCAAGAGAAAATAATCATACTAGGGGAATATTGGCTGCAGGATCTTCAACAAATTGAGCATGCCACTCTAGTGAGTGGAGGAGCTCCACCTCCAGCTGATGCATTCACCATTAACAGTCATCCAGGCCCCAACTACAACTGCTCCATTAATGATGTGTACCAACTTAATGTGATTCCAGGAAGGACCTATTTGTTAAGAACAATTAATGCAGGTTTAAACACTGAGAACTTCTTTGCCATTGCTAATCACAACTTAACAATCGTGGAAGCCGATGGTGAATACACGAAGCCATTCACCACAGACACGGTGATGCTTGGACCAGGTCAAACAATGAATGTCCTAGTTTCAGCCGATCAACCAGTAGGAAAATATTCCATGGCTGTCGCACCTTACAAGTCTGGCAGGATTGTCAAATATCAAAACGTTTCCGCCATTGGCTACTTCAACTATATAGGATCAGAATCTAACAGTTCATATTTACCAGCAAAATTACCTAAACTCGATGATAAACTAGCTGTCAAGACAGTCATGGATGGATTAAGGAGCCTAAATCAAGTGAATGTTTTCAAAGAAATTGATAAAAATATATTCATCACCATTGGATTGAATGTTAAAAAATGCCACTCAAAGACACCCAAACAAAACTGTCAAGCTATGAATAATGGGGTGCTGAAAGCTTCAATGAACAATATAAGTTTCGTTCATCCCCATATTTCAATCTTAGAAGCTTATTATAAGAAAATAAATGGATCGTATACTGAAGATTTTCCCGATGCACCCTCCAAGTTTTACGACTTCGTTAATGGTGCTCCTAATAACATTCCATATGACACCGAGTCATTGAATGGAACTAGAACTAAGGTCCTTGAATATGGTACCAAGGTGCAACTCATTTTGCAGAACACAGGGACAGTCAACATTGAAAACCACCCAATCCACATTCATGGCTACAGCTTTTATGTTGTAGGGTACGGCGCAGGAAACTATAATCCACTAACAGCACAACTCAATTTAGTGGATCCCCCATACATGAATACAATTGGAGTTCCGGTCGGTGGATGGGCAGCAGTCCGTTTTGTAGCTGATAATCCAGGTGTGTGGTACATGCACTGCCACATTGACATACACCAATCATGGGGACTAGGTATGGTATTTATAGTGAAGAATGGAAAAGGAGATCTGGAGTCTTTACCACGTCCCCCACCAGATCTGCCACCATGTTAA 1719 0.4066 MANLVTLFFLWLSFICTIYNVKLMAHGSAMGESTRFYDFKVQTKRVTKLCNSKDIVTVNGMYPGPVVYAQEDDRIIVKVTNKTPFNVTIHWHGIRQRLSCWYDGPSFITQCPIQAGQSFTYNFTVVNQKGTFFWHAHVSWLRGTVHGAMIVYPKNRIPLPFKVPYQEKIIILGEYWLQDLQQIEHATLVSGGAPPPADAFTINSHPGPNYNCSINDVYQLNVIPGRTYLLRTINAGLNTENFFAIANHNLTIVEADGEYTKPFTTDTVMLGPGQTMNVLVSADQPVGKYSMAVAPYKSGRIVKYQNVSAIGYFNYIGSESNSSYLPAKLPKLDDKLAVKTVMDGLRSLNQVNVFKEIDKNIFITIGLNVKKCHSKTPKQNCQAMNNGVLKASMNNISFVHPHISILEAYYKKINGSYTEDFPDAPSKFYDFVNGAPNNIPYDTESLNGTRTKVLEYGTKVQLILQNTGTVNIENHPIHIHGYSFYVVGYGAGNYNPLTAQLNLVDPPYMNTIGVPVGGWAAVRFVADNPGVWYMHCHIDIHQSWGLGMVFIVKNGKGDLESLPRPPPDLPPC* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1098 572 CDD CuRO_3_LCC_plant 417 555 IPR034289 GO:0005507
Mal5g1098 572 Gene3D - 20 153 IPR008972 -
Mal5g1098 572 PANTHER MULTI-COPPER OXIDASE 17 572 IPR045087 -
Mal5g1098 572 SUPERFAMILY Cupredoxins 165 318 IPR008972 -
Mal5g1098 572 SUPERFAMILY Cupredoxins 355 572 IPR008972 -
Mal5g1098 572 ProSitePatterns Multicopper oxidases signature 1. 530 550 IPR033138 -
Mal5g1098 572 Gene3D - 165 350 IPR008972 -
Mal5g1098 572 Pfam Multicopper oxidase 41 155 IPR011707 GO:0005507
Mal5g1098 572 Pfam Multicopper oxidase 443 555 IPR011706 GO:0005507|GO:0016491
Mal5g1098 572 PANTHER LACCASE-6 17 572 - -
Mal5g1098 572 ProSitePatterns Multicopper oxidases signature 2. 535 546 IPR002355 GO:0005507
Mal5g1098 572 TIGRFAM laccase: laccase 34 572 IPR017761 GO:0046274|GO:0048046|GO:0052716
Mal5g1098 572 CDD CuRO_2_LCC_plant 170 315 IPR034285 -
Mal5g1098 572 CDD CuRO_1_LCC_plant 37 153 IPR034288 GO:0005507
Mal5g1098 572 SUPERFAMILY Cupredoxins 31 176 IPR008972 -
Mal5g1098 572 Pfam Multicopper oxidase 168 317 IPR001117 -
Mal5g1098 572 Gene3D - 370 572 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1098 Mal-Chr5 19486746 19489452 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1098 K05909 - gmx:100789406 1000.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g1098 5 19486746 19489452 Mal5g1098 5 19486746 19489452 ECH