Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1090 ATGGAAACCAACAAGAACATGAAACAAACCACCAGCACAACCATGGAAGCAGAGTTTGAAGACTTACTCCCAATCATGGCAGAGAAGCTTGATGTAGAAACCTTTGTATCTGAACTATGTGGTGGTTTTAATCTTCTAGCAGACCAAGAACTAGGTTTGATCACAAGTGAGAGTCTTAGGAAAAATTCAGCTATGCTTGGTATGGATGGAATGAGTAAAGAAGATGCAGAAGCTATGGTTAAACAAGGTGATCTTGATGGTGATGGAAAGCTTAATGAAACTGAATTTTGCATATTGATGGTTAGGCTTAGCCCTGGAATGATGGAAGATGCTGAAACTTGGTTGGAGAAAGCTATTGAGGAACAGCTAAGAAATTAA 378 0.3915 METNKNMKQTTSTTMEAEFEDLLPIMAEKLDVETFVSELCGGFNLLADQELGLITSESLRKNSAMLGMDGMSKEDAEAMVKQGDLDGDGKLNETEFCILMVRLSPGMMEDAETWLEKAIEEQLRN* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1090 125 PANTHER CALCIUM-BINDING PROTEIN KIC 8 124 IPR044205 GO:0005509
Mal5g1090 125 Pfam EF-hand domain pair 52 102 IPR002048 GO:0005509
Mal5g1090 125 ProSitePatterns EF-hand calcium-binding domain. 84 96 IPR018247 -
Mal5g1090 125 Gene3D - 16 125 - -
Mal5g1090 125 PANTHER CALCIUM-BINDING PROTEIN KIC 8 124 - -
Mal5g1090 125 ProSiteProfiles EF-hand calcium-binding domain profile. 71 106 IPR002048 GO:0005509
Mal5g1090 125 SUPERFAMILY EF-hand 24 124 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1090 Mal-Chr5 19324928 19325305 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1090 9 125 EF-hand Containing Proteins AT2G46600 72.034 5.23e-59 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1090 K24345 - gmx:100802677 204.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g1090 5 19324928 19325305 Mal5g1090 5 19324928 19325305 ECH