Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0948 ATGAATTTGAGTAAAATATTTGTTTTTGATAGTAAGAGAAAAATGGGTCTGAATTTCATGATTTTTGTAGTTATGGTGTCATGGTTTTGGTCAATTCCTACTACTACATGTGCCTTGGCTGCAAAACAACAAGAAAATCAGAAGCTGAGGTTTGATCAAAATGGTGAATTCAAGATATTGCAGGTTGCAGATATGCACTATGCAAATGGAAAAACTACACTTTGCTTAGATGTGCTTCCTTCTCAAAATGCTTCTTGTACTGACCTCAATACTACTGCTTTCATTCATAGGATGATTCTTGCTGAGAAGCCTAATCTTATTGTCTTCACTGGAGATAATATCTATGGCTATGATTCCTCAGATTCGGCTAAATCAATGGAAGCTGCTTTTGCTCCTGCAATTGAATCAAACATTCCTTGGGTGGCTGTTTTAGGGAACCATGACCAAGAAGGATCACTCTCTAGGGAAGGTGTGATGAAATATATTGTTGGAATGAAAAACTCTTTATCTAAACTTAATCCTCCAGAAGTACACATCATTGATGGTTTTGGGAACAATAACTTGGAAATTGGTGGTGTTCAAGGTACTGATTTTGAAAATAAATCAGTTCTCAATCTATACTTTCTTGACAGTGGAGATTATTCCAAAGTTCCGACGATTCCTGGTTATGATTGGATCAAGCCCTCGCAGCAACTTTGGTTTGAGCGAACGTCTGCTAAGCTTCGGAAAGCGTACATAAAAGGACCAGTGCCTCAGAAAGAAGCTGCACCTGGTCTTGCATACTTTCACATACCCTTGCCGGAATATACAAGTTTTGATTCATCAAACATGACAGGTGTGAAAATGGAAACGGATGGCGGTGATGGCATTAGTTCTGCTTCGGTGAACTCTGGTTTCTTCACAACCTTGGTTGAAGCAGGAGATGTAAAGGCCGTTTTCGTTGGCCACGATCACCTCAATGACTTCTGTGGCAAGCTAATGGATATACAACTTTGTTATGCTGGAGGGTTCGGATACCATGCTTATGGAAAGGCTGGATGGACTCGGAGGGCAAGAGTGGTGGTAGCTAGCTTGGAGAAGACAGATAAAGGAAGTTGGGGAGCTGTCAAGTCGATTAAAACATGGAAGCGCCTCGATGATCAGCATCTTACTGGAATTGATGGTGAGGTCCTATGGAGCAAGATCTCTCCCGATGGTGCTAAAACGGGAAGCAAAGAGCTGAATATCCGATTTGCAAGTTCAAAGTCACAAATGTGGTCTGTAAAGTGA 1269 0.4106 MNLSKIFVFDSKRKMGLNFMIFVVMVSWFWSIPTTTCALAAKQQENQKLRFDQNGEFKILQVADMHYANGKTTLCLDVLPSQNASCTDLNTTAFIHRMILAEKPNLIVFTGDNIYGYDSSDSAKSMEAAFAPAIESNIPWVAVLGNHDQEGSLSREGVMKYIVGMKNSLSKLNPPEVHIIDGFGNNNLEIGGVQGTDFENKSVLNLYFLDSGDYSKVPTIPGYDWIKPSQQLWFERTSAKLRKAYIKGPVPQKEAAPGLAYFHIPLPEYTSFDSSNMTGVKMETDGGDGISSASVNSGFFTTLVEAGDVKAVFVGHDHLNDFCGKLMDIQLCYAGGFGYHAYGKAGWTRRARVVVASLEKTDKGSWGAVKSIKTWKRLDDQHLTGIDGEVLWSKISPDGAKTGSKELNIRFASSKSQMWSVK* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0948 422 PIRSF Ptase_At2g46880 7 392 IPR011230 -
Mal5g0948 422 Gene3D - 70 407 IPR029052 -
Mal5g0948 422 PANTHER - 12 396 - -
Mal5g0948 422 CDD MPP_Dcr2 55 343 - -
Mal5g0948 422 Pfam Calcineurin-like phosphoesterase 57 319 IPR004843 GO:0016787
Mal5g0948 422 PANTHER PHOSPHOESTERASE, METALLO-DEPENDENT PHOSPHATASE-LIKE PROTEIN-RELATED 12 396 - -
Mal5g0948 422 SUPERFAMILY Metallo-dependent phosphatases 55 367 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0948 Mal-Chr5 16686832 16689824 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0948 - - gmx:100794167 655.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0948 5 16686832 16689824 Mal5g0948 5 16686832 16689824 ECH